Sorghum bicolor (sorghum): 8062043
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Entry
8062043 CDS
T01086
Name
(RefSeq) structural maintenance of chromosomes protein 6B
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbi03400
]
8062043
DNA repair and recombination proteins [BR:
sbi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
8062043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
AAA_21
ABC_tran
MukB
Motif
Other DBs
NCBI-GeneID:
8062043
NCBI-ProteinID:
XP_002462109
UniProt:
C5X880
A0A921UVJ3
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All DBs
Position
2:complement(46790028..46825894)
Genome browser
AA seq
1039 aa
AA seq
DB search
MAAGTISRIRLENFMCHSSLHIELDQHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRA
ASLKDFIKNGCSYAAITVDINNHGEDAFKPEVYGDTIILERRITESAGSTVLKDQHGRKV
AHRKDDLNEIIEHFNIEVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNDLLA
TIRDNLNIADSIVEELEASIRPALRELDEIQEKIKNMEHIEEIAHEIENLKKKLAWAWVY
DVDKEIGGQEENLEKLKERIPACQERIDQNIAIIEELRKEFIVKKENFKSFLEKTQEARR
MKEKMDHDIREAVKLKMDLEKEHARGRQVLNKMNARVRQLEEQVHEFELQHMQQTQAEVS
QVEDSLRELQQEINFAHLNATRLNEEEKKSSEELRGIIKNISDIGKEIEEDGRRINQLKS
QIDDLRQRQRDKLTAFGGERVQSLYKSIERHNSRFKCSPIGPIGCHLQLASDYWSVAIDY
ALGRLLDAFIVSCHKDSLVLRECAKEVNYRNLQIIIYDFTKPRVEIPDHLLPSTPNPTVL
SVIHSEIPTILNVLVDQGHAERQVLVRDYAMGKSVAFDQRIRNLKEVYASDGCKMFCRGS
VQTVLPPNRNWRAGRLCTSLEDKITEMEQEVTEIKQINSERLDRKRKLVADRDSINLELR
QLKRKREDEELHLERKKAQLDDTKKISVDNSHAAAVDTSELVAEMTRLKEDIENQELVLQ
KINLKLTNALQEENNTRASYKDIIESAHAEMGSISDAERELQLVEEKIHDAEQEKAHYER
VMETKVLGLITMAESELTRLQQLHQVNFEKASTICAESEVDALGGVDGSIEQLSARISKL
NKKFQQESRRYTETIDDLRALHDKKGQKILRKQQMYAGFRDKLNACQKALDLRWKKFQRN
AGLLKRQLTWLFNEHLGKKGISGHINVDYKNEVLSVELTMPQDASRDTIRDTRGLSGGER
SFSTLCFTLSLHGMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAVTQGSQWIFITPHDI
SMVKAGDRIKKQQMAAPRG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggacgatctcccgcatccggctggagaacttcatgtgccactccagcctc
cacatcgagctcgaccagcacgtcaatttcatcaccggccagaacggaagcggaaagagc
gccatcctcacggccctctgcgtcgccttcggctgccgcgctaagaacacccagcgcgcc
gcttccctcaaggatttcatcaagaacggttgcagctatgcagcaattactgtggacatt
aataaccatggagaagacgcgtttaagcccgaagtatatggggacactattatattggaa
cgcaggattactgaatcagctggttctacagttttgaaggatcaacatgggaggaaggtg
gcgcatcgcaaggatgacctaaatgaaataattgaacattttaacattgaagttgaaaac
ccttgtgtaattatgagtcaagacaaaagcagagagtttttacattcaggaaatgacaag
gataagttcaagttctttttcaaggctacgcttcttcaacaagtgaatgacttgcttgct
acaataagagacaacctgaacattgcggactctatagttgaagaactggaagcgtcaatt
aggccagcgctcagagaactagatgagattcaggagaagataaagaatatggaacacatt
gaagaaatagcacacgagattgaaaacttgaagaaaaagttggcttgggcatgggtttat
gatgttgacaaggagattgggggacaagaagagaatcttgagaaactcaaagagcgtatc
cctgcatgccaagaacgaattgatcaaaatatagccattatagaggaactgaggaaagaa
tttattgtgaagaaagaaaattttaaatcttttttagagaagacacaagaagctaggagg
atgaaggaaaaaatggatcatgacattcgtgaggctgtgaaactgaagatggatctagag
aaagagcatgctcgtggaagacaagtgttgaataaaatgaatgcccgtgtgagacaacta
gaggagcaagttcatgaatttgagcttcagcatatgcaacaaactcaggctgaagtatct
caagttgaggatagcctacgggaattacagcaggagataaactttgcccatttaaatgct
acaaggttaaatgaggaagaaaagaaatcatccgaagaactacggggcattattaaaaac
atcagtgacatcggaaaagagatagaagaagatggacgtaggatcaatcaactgaagtct
caaattgatgatctacgccaacgccaacgtgacaaactaacagcctttggaggagagaga
gttcagagcctctataaatcaatagagagacacaatagtagattcaaatgctctcctatt
ggtccaataggatgtcatttgcaactggcaagcgactactggtccgttgcaattgattat
gcattagggaggttattagatgcttttattgtctcatgtcataaggattcacttgtttta
cgagaatgtgcgaaagaagtgaactaccgcaatcttcaaattattatatatgacttcaca
aaaccacgggttgaaattccagatcatttgcttccttcaacaccaaacccgacagtactt
tcagttattcattcagaaattcctactatattaaatgtattagtggatcagggccatgca
gagaggcaggtcctagttcgagattatgcaatgggaaagtctgttgcatttgatcagagg
atacgaaatctgaaggaagtatatgcttctgatggttgcaaaatgttttgtagaggttct
gttcagactgttcttcctccaaataggaactggagagctggtcgtttgtgcacttctcta
gaagataaaataactgaaatggagcaggaagttactgaaattaagcaaataaactcagag
aggttggatcgcaaaaggaaattagttgctgatcgagacagcatcaatttagaattgaga
cagttaaagagaaaaagagaagatgaggagttgcatctggagcgtaaaaaggcgcagttg
gatgacaccaagaaaatttctgttgacaatagtcatgctgctgctgtagatacctctgag
ctagtagctgaaatgacgcgattgaaggaagacattgagaaccaagaattagttctgcag
aaaattaatttgaaacttacaaatgctttgcaagaagagaataatacaagagcttcttac
aaggacattattgagtctgcacatgctgaaatggggtctattagcgatgctgagcgtgaa
ttgcagcttgttgaagaaaaaatacatgatgctgagcaggagaaggctcactatgaacgt
gttatggaaacaaaggttttaggtcttattacaatggctgaatcagagttgacacgtctt
caacagcttcatcaggtgaattttgaaaaggcttcaacaatttgtgccgagagtgaagtg
gatgctcttgggggtgttgatggatccatagaacaattaagtgctcgtattagtaaatta
aacaagaaatttcagcaagaaagcagaagatatactgagaccattgatgatctgagagca
ctgcatgacaaaaaaggacagaagatcttgagaaaacaacaaatgtatgcaggttttagg
gacaaattaaatgcatgtcaaaaggcattggacttgcgatggaagaagttccagagaaat
gcgggtcttttgaagcgtcagcttacgtggctgttcaatgagcacctgggaaagaaaggt
attagtgggcacatcaatgtagactataagaacgaagttctgtctgttgagctgacaatg
cctcaagatgcgtctcgtgataccattagagacactagaggactttcaggtggagaacga
tctttctcaaccctttgcttcaccttatctcttcatggaatgacagaagcaccatttagg
gccatggatgagtttgatgtattcatggatgcggtgagccgcaaaataagcttagacacc
ctagtagattttgctgtcacacaagggtctcaatggatatttataacccctcatgatatc
agcatggtgaaggctggggataggatcaagaagcagcaaatggctgcccctcgcggttga
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