Sorghum bicolor (sorghum): 8062105
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Entry
8062105 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8062105 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8062105
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
8062105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
8062105
NCBI-ProteinID:
XP_021312165
LinkDB
All DBs
Position
3:complement(67991033..68001430)
Genome browser
AA seq
1492 aa
AA seq
DB search
MAAAPPGAGEDIKDGVEVCVFDESADGFLRTVRAISELVDKEPEPDFPEAEVERLSSSIT
FLREWRHFSYEPKSVTFTSGTESTSSRDDMHSVTLPQFSSASVPQITPQEDRRDHTVSFD
FILYAGGNVWALDWCPRLCKKADSSINCEYLAVSAHPPGSSYHKLGMPLTGRGIIQVWCL
LAPFEDAHARRSINVCNNSKRRGRPRKIPCSDKLEPIPKGPRGRPRKRPCSDQLEPVPKR
PRGRPRKCPLPDAKLEGSSQNGQSQDIILFDSSSVISDDLPLAYVMPTVKSVQSTPKRGR
GRPRKNSSDKLTGSSGIVSEAVCTAPSPTTICTKPKGRRGRPRKYPIPMNDGSVSGADVE
LGKGTTCQPASFGCSLDHNACTEFNANLSIVAVDAALPLIDKPTCSSGTVSGDVCTAPSP
KTVICTKPKKPRGRPRKYPVPINARSVSGTVSGDLWTAPSPTTAICTKPKKPRGRPRKYP
VPINGRSVSGTDAELGQETTCQPVSFGCSLEHTVCTELNANLSIVPVDAALPIVDELCSS
SGAVVKESVCTEPAPATATRKQPKRTRVMPQKYSDTMIELGKDTTSQPVLSSMGHTACTE
SNSSFSIVAVDASSSFTSPSTATCDKKSKGQMIRGNDKKKTISNALYCPVVSGVESQRIC
STEILPNDPAVSVENALPSAQNVVSMNELCSASLLNCEGKACKGAVSDDSVLPIHISPKS
SNKRESSGKRGRGRPKTIPLSAGTGRFVASGASLPKTTSVLTGSNNLTSLNKSGGKFIVS
SLGSCGCDIEKCSVHSGVLLSDDASPAHGLHNANCKEELNTKIGKGGCRKKPVSAEHSHF
TDFNVKEQKMQTTPKSGDSVVLVENCMEGQGPRKAGGQLQRIPASNESSGKSVGVETHKI
ETLSTPMTKGSSKNDDMGHGAGLNQSKNAIAGCEGMKVTESNTANYTSHCNENARANQVA
PSFKNSDRVIDETEAAELVPLKESWEDDNMFSCVNSNSSSITRDIAQPRVVLCLAHNGKV
AWDIKWKPPLLSQPEQKSRLGFLAVLLGNGILEVWEVPSPCMIQKIYSSSKVEGSDPRFL
KLQPVFRCVKVKCRNRQSIPLTVDWSPTPPHDMILAGCHDGTVALWNFSMNLPTQDSKPF
MCVTADSVPIRALSWAPYISEESTNTFVTAGEDGLKFWDLRDPYRPLWELTTAPKAVLSL
HWLKDGRGIVICLEDGTLKFLSLPRIANDVPATGRPFAGTKTQGVGTYQLSEYLIWSVHA
SEPTGCVAYCGADGTAVYFQLNSRFWDKEPGRNRVPYFLSGSLSEEGENIKIGSRLQTSP
LPNVPVMTKKGSKPCQNIVQGLATNNVTGLLTCQLNSPTRNSDAVNPEVHDDQDNGQSEE
QGAGAVNQEHDGDRDDGHSEEHAADMVNTEFGDDQDDGHSEEQGTGAIILASPTKEENDG
TWNSKGGESPKDLKVVPPNSVALHQVRWNMNKGSERWLCYGGAAGIIRCQRI
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcaccgccgggagccggagaagatattaaagacggcgttgaggtgtgcgtg
ttcgatgagtcagcagatgggttcttgagaactgtgcgcgccatctcggagctcgtcgac
aaagagcccgaaccagacttccccgaggcggaagttgagcggctctcctcttcaataacg
ttcctcagagaatggaggcacttctcttatgagccaaaaagtgtaactttcactagtggc
actgagtcaacttcatctagagatgacatgcacagtgtaaccttgccacagttttcatct
gcttctgttccccagatcacacctcaggaagaccgaagggatcatacagtcagctttgat
tttattctatatgcgggggggaatgtctgggccttggactggtgccccaggttgtgcaaa
aaggctgactcttctataaactgtgagtatcttgctgtttctgcgcaccctcctggttct
tcttaccataaacttggcatgcccttaaccgggagaggtatcattcaagtctggtgtctg
ttagcaccatttgaagatgcacatgctcgccggtcaataaatgtatgcaataatagtaag
cgaagaggaaggcctagaaaaataccttgtagtgataagctggaacctattccaaaagga
ccaagggggaggccaagaaagagaccttgcagtgatcagttagaacctgttccaaaaaga
ccaaggggcagaccaagaaagtgtccattgccagatgcaaaattagaaggttcatcccaa
aacgggcaaagtcaggatatcattctttttgatagttcaagtgttatttcagatgacctt
ccattggcttatgtcatgccaactgtgaagtctgtgcaatcaactcctaaaagaggtaga
gggcgacctaggaaaaattcaagtgacaaactgacaggctcatctggtattgtatcagaa
gctgtgtgtacagccccatctccaacaacaatctgtacaaaacctaagggacgacgggga
aggcctcgaaaatatccaattccaatgaatgatggatctgtttcaggtgctgatgttgaa
ttagggaaagggacaacttgtcaacctgcttcatttggctgcagtttggaccacaatgct
tgcacagagtttaatgctaatttaagtattgttgcagttgatgcagcattgccgcttatt
gacaaaccgacctgttcatctggcactgtatcaggagatgtgtgtacagccccatctcca
aaaactgtgatctgtacaaaacctaagaaaccacggggaagacctcgaaagtatccagtt
ccaatcaatgctagatctgtatctggcactgtatcaggagatttgtggacagccccatcc
ccaacaactgcaatctgtacaaaacctaagaaaccacgggggagacctcggaagtatcca
gttccaatcaatggtagatctgtttcaggtactgatgctgaattagggcaagagacaact
tgtcagcctgtttcatttggctgtagtttggagcacactgtttgcacagagcttaatgct
aatttaagtattgttccggttgatgcagcattgccaattgttgacgaactgtgcagttca
tctggtgctgtagtaaaagaaagtgtgtgtaccgaaccagctccagcaactgcaactcgt
aagcaaccaaagagaacaagggtgatgccacaaaaatactcagacactatgattgaactg
gggaaagatacaactagtcagcctgttttatccagtatgggtcacactgcttgcacagag
tctaactctagttttagcattgttgcagttgatgcatcatcatcatttacatctccatct
actgcaacttgtgataagaagtcaaaaggtcagatgattagaggaaatgataagaagaaa
acaatttctaatgctctatattgcccagtggtttctggtgttgaatcacagagaatttgt
tccacagaaattcttccaaatgatcctgcagtctctgttgaaaatgctttaccatctgca
cagaacgtggtatcaatgaatgagctttgttctgctagcttgttaaactgtgagggtaaa
gcgtgtaaaggtgctgtttcagatgattctgtacttcctatccacatttcacctaaatca
agtaataaaagagagtcaagtggcaagaggggaagaggaaggcctaaaacgataccactt
tctgctggaactggtcgttttgtggcttctggtgccagcctcccaaagacaacctctgta
ctgactggttcaaacaatctcacatctttgaacaagagtggtggcaaatttatagtaagt
agccttggttcatgtgggtgtgatattgagaaatgcagtgttcattcaggtgttttgttg
tctgatgatgcatcaccagcacatggcttacacaatgcaaattgtaaggaagaattaaat
accaaaataggaaaagggggatgtagaaagaagcctgtttcagctgagcacagtcatttt
actgattttaatgtcaaagaacaaaaaatgcagacaactccaaagtcaggcgattctgtg
gtcttggttgaaaattgtatggaaggacaaggccccagaaaggctggggggcaacttcaa
aggatacctgcttcaaatgagagtagtggcaaatctgttggtgttgaaacgcataaaata
gagacattatctacaccaatgactaaaggatcatctaaaaatgatgacatgggtcatggg
gctggtttgaatcagtctaagaatgcaattgctggttgcgaaggcatgaaagttactgaa
agcaacactgccaattatacttctcattgtaatgaaaatgcacgagcaaatcaagttgca
cctagtttcaagaacagtgatagggtcattgatgaaacggaagctgcggaacttgtgcca
ctcaaggaatcatgggaagatgacaatatgtttagttgtgtaaactcaaactcatcttca
attacaagggacattgctcaaccaagagttgtcttgtgtttagctcacaatggcaaagtc
gcttgggacatcaaatggaagcctcctttactaagtcagcctgaacagaaatcacgactg
ggtttccttgcagtattgttggggaatggcattcttgaagtgtgggaagttccatcacca
tgcatgatccagaaaatatattcgtcctctaaggtggagggttctgaccctcgttttcta
aagctacaacctgtatttaggtgtgtcaaagtgaagtgcaggaacaggcaaagcattccc
ttgacagttgattggtcacctactcctcctcatgatatgatattggcgggttgtcatgat
ggaacggttgctctatggaacttctcgatgaatttgccaacacaagattcaaaacctttt
atgtgtgtcactgctgattctgttcccattagagctctctcttgggcaccatatataagt
gaagaaagcacaaatacttttgtcactgctggagaggatggtctaaagttctgggattta
agagatccgtaccgtcctctttgggagctaactactgctccaaaggctgtattaagtctt
cattggctaaaggatggaagggggatcgttatctgtttggaagatggtacattgaagttt
ctaagcttgcctcggattgcaaatgatgttccagccactggaaggccatttgctggaaca
aaaactcagggtgttggaacttatcagttgtcagaatatttgatttggagtgtccatgcc
tcagaacctacaggttgtgtggcttactgcggggcagatggtactgctgtgtacttccag
cttaattcgagattctgggataaagaacctgggcgtaaccgcgttccttatttcctctct
ggatcattatcagaggagggagaaaatattaagattggcagcaggctgcaaacatctcca
ttacctaatgttcctgtgatgaccaaaaagggttcaaaaccatgccaaaatatagttcag
gggctcgctacaaacaatgtcactggcctgctgacatgtcagctcaactcccccacaaga
aacagtgacgctgtaaatccagaagttcatgatgatcaagataatggacaaagcgaagag
caaggagcaggtgctgtaaatcaagaacacgacggtgatcgagatgatggacacagtgaa
gaacatgcagcagacatggtaaacacagaatttggcgatgaccaagacgatggacacagt
gaagaacaaggaaccggtgcaataattttagccagtcctacaaaggaagagaatgatgga
acatggaacagcaagggtggtgaatccccaaaagaccttaaagtcgtccctccgaattct
gtcgctttgcatcaagtgcgatggaacatgaacaagggtagcgagagatggctgtgctat
ggaggtgctgcaggcatcatacgatgccagaggatctga
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