Sorghum bicolor (sorghum): 8062216
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Entry
8062216 CDS
T01086
Name
(RefSeq) U3 snoRNP-associated protein-like YAOH
KO
K14793
ribosomal RNA-processing protein 9
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8062216
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
90S particles
Other 90S particles
8062216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
VPS8_N
Beta-prop_DCAF4
WD_LRWD1
Nop14
Motif
Other DBs
NCBI-GeneID:
8062216
NCBI-ProteinID:
XP_002464179
UniProt:
C5WR85
A0A921RZ60
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All DBs
Position
1:12714135..12724469
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AA seq
512 aa
AA seq
DB search
MAPRPRKRASRPKPRPGSRRGGGGGDDDPFFESEPKRRRGGRDEDIESEDSDDDGGVAAV
GGGFDEDGDGGGEEEDEETVGEKKMRMAKEWLQKVTEVAKRGQEDDDEDEDESGGRRVAE
ILQRKQLEESGRKRREIAARVLPPGPQDGFKFLVKHRQPVTAVALSKDSDKGFSASKDGV
IMHWDVETGKCEKYIWPSENVLVSHHAKPPVSAKRSKQVLALAASSDGRYLASGGLDRHI
HLWDVRSREHIQAFSGHRGPISCLSFAPDSSELFSGSFDRSIMQWNAEDRTYMNCLYGHQ
NEILTMDALSKDRILTVARDRTMHLWKIPEESQLVFRAPAAASLESCCFIDDKEFLSGSD
DGSIELWSIMRKKPILIIKNAHAVSCTNLNSVDNDDESPKENGIHKPENVPSAAQSWVGT
VAARRGSDLAASGAGNGLVRLWAVKPDSKGVEPLFDLKLDGFVNSLAIAKSGRFIVAGVG
QEPRLGRWGRVRSAQNGVAIHPIRLKDEKEDL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgcccccgcaagcgggcctcgcgccccaagccccgcccgggctcccgacgt
ggcggcggcggaggggacgacgaccccttcttcgagtccgagcccaagcgccgccgcggg
ggccgtgacgaggacatcgagagcgaggacagcgacgacgacggcggcgtggctgcggtt
ggtggcggatttgatgaggatggggacgggggcggcgaggaggaggacgaggagacggtg
ggggagaagaagatgcgtatggcgaaggagtggctgcagaaggtcactgaggtcgctaag
agggggcaggaggatgacgacgaggacgaggacgagtcgggagggagacgggtggcggag
atcctgcagaggaagcagctcgaggagagcggcaggaagcggagggagattgccgcgagg
gtattaccaccgggccctcaggatggctttaagtttcttgtgaagcaccggcaacctgtt
actgctgttgctttatccaaggatagtgataagggattttcagcatcaaaagatggagtc
attatgcattgggatgttgaaactgggaaatgtgagaagtatatatggccaagtgaaaat
gtgttggtttcacatcatgctaaaccaccagtatcagctaaaagaagcaagcaagtgctg
gctttagctgccagttctgatggtcgttacttggcgagtggtggcttggaccgtcatatc
catttatgggatgttaggtcacgggaacacatacaggcatttagcggccatcggggacca
atatcatgtctttcttttgcaccggactcttcagagctattctctggttcttttgaccgt
tcaataatgcagtggaatgcagaggatagaacatacatgaactgtttatatgggcatcag
aatgaaatcttgacaatggatgcacttagcaaagacaggattctaactgtagcacgggac
cgtacgatgcacctttggaagattccagaagagtcgcagttagtgttccgtgctcctgct
gccgcatctttagagagttgctgctttattgatgacaaggaatttttgtctggatctgat
gatggaagcattgagctttggagcataatgaggaaaaagcctattctcataataaaaaat
gctcatgcagtatcatgtactaaccttaattcagttgacaatgatgatgagtcacctaaa
gaaaatggaatacataaacctgaaaatgtgccatccgcagcccagtcatgggttggtact
gttgctgcaagaagaggttctgaccttgctgcatcaggagcaggaaatggtttagttcgt
ctctgggctgtcaaacctgattccaagggagtcgagccattattcgatttgaaactggat
ggatttgttaattctctggccatagcaaaatctggacgttttattgttgctggtgttggc
caggagcctcgcctgggaagatggggacgagttcgatcggcccaaaatggagttgcaatt
cacccaatccgactaaaagatgagaaagaggatttgtag
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