Sorghum bicolor (sorghum): 8062271 Help Entry 8062271           CDS       T01086                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism sbi  Sorghum bicolor (sorghum) Pathway sbi04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sbi00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     8062271  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sbi04131]     8062271 Membrane trafficking [BR:sbi04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     8062271 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H DUF4837 Motif Other DBs NCBI-GeneID:  8062271 NCBI-ProteinID:  XP_002463992 UniProt:  C5WN11 LinkDB All DBs Position 1:8935477..8946978 Genome browser AA seq 998 aa AA seqDB search MVHSAYDAVELVADVPGQIEAVASHAGKLLVAVSDTEGFLWGSDCSLRIYSAPPPSDGGG EIRWDGTYALERQEPRFWRRPPLAMEVSASRDLLISLSEWVALHRLPGLETVAVVSSKTK GANVFAWDERRGFLAVGRQKRLTIFRLDSGREFVEVKEFGVPDILKSMAWCGDNICLGIR REYMIINSMTGALTEVFSSGRIAPPLVVPLPTGELILGKDNIGVFVDQNGKLIQDGRIIW SDTPASVVIHRPFAVARLSRHVEIRSLRAPNALVQTVVLRDVQKLVQTDNCILAALSNSV HGLLPVPIGAQIVQLTASGEFEEALALCKLLPPEDSNLRAAKESSIHIRYGHFLFDSGSY EEAMEQFSDSHVDITYVLSLYPSIVLPQTNIIGEHDKLLDMPELTRESSDVTDEMESYSL QLHDPDDKSPLEAKKMSHNALAALVKYLQKKRSGIIERATAEVTEEVVSGAVHHSLKLSE PYKAKKLSKKRAQTHTSSIAREMATVLDTSLLQALILTGQSSVAIELLKGLNYCDLKICE EFLKERSEYMVLLELYKSNEMHREALRLLNQLVEESKSEMENADFNKKFNPQMILEYLRP LCRSDPMLVLESSLYVLERNPSETIQLFLSENVPADLVNSYLKQHAPNLQSTYLELMLSM NDTGINPNLQNELVQLYLSEVLDWYKILKEEGNWTEKTYSPTRKKLISTLESNSGYNTDL LLKRLPQDALFEERAILYGKINQHLRALSLYVHKLQMPERAVAYCDRVYEEREQQPSKSN IYFNLLQIYLNPRKAEKEFEQKIVPVASQYSGIQKASATKIKGGRIGKKVVEIEGADDIR FSPSGTDSGRSDGDGDDVSDVNDGGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQD LVSFLEPLLRNSSEHRRNYLVIKNLIFRANLQVKEDLYKRCQAVVKIDGDSMCSLCHKRV ANSAFAIYPNGQTLVHFVCFKESQQIKAVRGANSLKRR NT seq 2997 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagcgcgtacgatgctgtcgagctggtggccgacgtgccgggccaaatcgag gccgtcgcctcccacgctgggaagctcctcgtcgcggtttccgacaccgaaggtttcctc tggggctccgattgctccctgcgcatctactccgctcctcccccctccgacggcggcggc gagatccggtgggacgggacctacgcgctcgagcggcaggagccgcggttctggcggcgc ccgcccttagccatggaggtcagcgccagccgcgacctcctgatctcgctctcggagtgg gtcgcgctccaccgcctccccgggctcgagaccgtcgccgtcgtctctagcaagacaaag ggggccaacgtctttgcctgggacgagcggcggggcttccttgccgtcggtcgacagaag cgactcaccatcttccgcctcgacagtgggcgagaatttgttgaagtgaaggaatttgga gtgccagatattttgaaatcaatggcctggtgtggtgataacatatgtcttggaatcagg cgggaatatatgataataaatagcatgactggggcactaacagaagtgttttcttctggg aggattgctcctcctttagttgtgcctcttcctactggggaactgatccttggcaaggat aacattggggtattcgttgatcaaaatggcaaacttattcaagacggcagaataatttgg tcagacacaccagcttctgtcgttatacatagaccatttgctgtggcacgcctgtcacgg catgttgagatacgctctcttagggctcccaatgcattggttcagacagttgtgctccgt gatgttcaaaagcttgtccaaactgacaactgtatacttgctgcgctatctaactctgtt catggtttgttgcccgttcctattggcgctcagatagtgcaattgaccgcttctggggag tttgaggaggcactagcattgtgtaagctacttccacctgaggattcaaatttacgagct gcaaaggaaagctcaatacacataagatatggacactttttgttcgatagtgggagctat gaggaggcaatggaacagttttcagattcacatgtggacattacttatgtgttatctctg tacccatctatcgttctgcctcaaacaaatattataggtgaacatgacaagctgctggac atgccagaattaacaagggaatcctctgatgtgacagatgagatggaatcatactcttta cagcttcatgatccagatgataaatcgccattggaggcaaagaaaatgagtcacaatgct ctagctgcccttgtgaagtatttgcagaagaaaagaagtggaataattgagagagcgacg gctgaagtaacagaggaggtggtctctggagctgttcaccacagcttaaaattatctgag ccatataaggcaaagaagctgagcaagaaacgagctcagacacatacaagctctattgct agagaaatggcaactgtactagatacttctctgcttcaagctcttattcttactgggcag tcatcagtggcaatagagttgttgaaaggactcaattattgtgacctgaagatatgcgaa gagtttttgaaggaaaggagcgaatatatggttttacttgaactctataaaagcaatgaa atgcaccgtgaagctctccgactactcaatcagttagttgaagaatcaaaatctgaaatg gagaatgcagattttaataaaaaatttaaccctcaaatgatacttgaatatctcaggccc ctttgtagatctgacccaatgctggttttggagtcttccttgtacgtccttgagcgcaac ccatcagaaactattcagctctttttgtctgaaaatgttccagcagatttggtaaattca tatctgaagcagcatgctccaaatttgcagtcaacgtacttagaactaatgctctcaatg aatgatactgggatcaaccctaatctgcaaaatgagctggtgcaactgtacctttctgaa gttttagactggtacaagattctgaaggaagagggaaactggacagagaaaacatattcc ccaacacggaagaagttaatatctacattggagagcaattcaggttacaatacagactta cttcttaagcgtcttccccaggacgctctttttgaggagcgtgctatattgtatgggaaa ataaatcaacacctcagagcgctctctctctatgttcacaagctccagatgccagagcga gcagttgcatactgtgaccgtgtttatgaggaaagagaacaacaaccatccaaatcaaat atctattttaatcttctacaaatttatctgaacccaagaaaagctgaaaaggaatttgag cagaaaattgttccagttgcatcacaatactctggaatccaaaaggctagtgctactaag atcaaaggggggcgcataggtaagaaggtcgttgagattgagggggctgatgacatacgg tttagccccagcggaacagatagtggccgaagtgatggtgatggagatgatgtaagcgat gtaaatgacggaggccctataatgttaaatgaagcactggaactgttaagccaacggtgg gacagaataaatggtgctcaggctcttaggcttttaccaagagacactaaactccaggat cttgtatcatttcttgagccactattgcggaactctagtgagcatcggcgcaattatttg gttatcaaaaacttgattttccgggcaaacttgcaggtcaaggaggatctgtataagcgg tgtcaagctgtcgtcaagatcgatggagatagtatgtgttctctttgccataagcgtgtt gcaaatagtgcttttgccatttatccaaatggacagactttggtgcattttgtctgcttt aaagaatcacagcaaattaaggctgtgagaggagcaaactctctgaaacgaagataa

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