Sorghum bicolor (sorghum): 8062314
Help
Entry
8062314 CDS
T01086
Name
(RefSeq) U-box domain-containing protein 43
KO
K08332
vacuolar protein 8
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8062314
03029 Mitochondrial biogenesis [BR:
sbi03029
]
8062314
Membrane trafficking [BR:
sbi04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
8062314
Other autophagy associated proteins
Micronucleophagy
8062314
Mitochondrial biogenesis [BR:
sbi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
8062314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Arm_2
ARM_LIN_2nd
T4_RIIA1
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
8062314
NCBI-ProteinID:
XP_002459091
LinkDB
All DBs
Position
3:complement(72848736..72852354)
Genome browser
AA seq
765 aa
AA seq
DB search
MMKRHGLLPLPCGCVCVSRKSEARSSPFLPSRPISSSPSLSAHGRLDRFAVSTAAFLLHS
RSHAPSRPALASHSRKACRCCLLVAHLPRYAMAGAAAAAAVDVEDLLVRVKTGAEDELAA
VAREVEALAGDGRLGEEDDEDGLLVPALLARLAAAGTADARVSVMAALRRLAGCVAGESK
ERLASIEALSSIVRSLSRDVDERREAIAVLLDLSDIPQVRQRIGRIKGCIVMLVTLRNAR
ESGTEDDAEKLLSILSSNPQNVLLMAEAGYFRPLIQYLKQGSDMNKVLMATAISKMFLSE
HMKSSLGEDGAIEPLVDMFKYGNLEAKHSALGALRNLSSSLQNAELLINSGITGPLLQLL
FSVTSVLMTLREPASAILAAIAQSERILLHKDVAPQILSLLNLSSPVIQLHLLRALNSIS
GHANAKRARSKIRKNGGVQLLLPFLTEKNVDIKIAALHLMFHLSKDSSQELAEQFRETHL
DILVKIISSPTSRDEKAAAVGILSNLPVTDKKVTEILMRSNLLPILITLFEANIATSVTP
QRMWLLEGIAGVFIRFTVTWDRKLQSSAVGYGVVPCLVKLLSEGSVDAKSKAATSLAQLS
QSTMALLKSKLPRWLCVPSSAESYCIVHSCQCTVKSTFCLVKAGAVNPLVQILEGEERGA
DGAVLEALGTLMQDEIWENGSRVIEKASGIHALLRIAEAGELSSQDRAIWMLERMFRLEA
HRERYGEITQALLIDLAQKGDPALKPMIGKILAHLELLQTQSSYF
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacggcacggcctcctccctctcccctgcggctgcgtctgcgtgtcccgaaaa
tcggaggccaggtcgtctcccttcctcccgtcccgtcccatctcgtcgtccccgtccctc
tccgcccatgggcgacttgaccgcttcgccgtgtccacagctgccttcttactccattcc
cgctcgcacgcaccctcccgtcccgcgctcgcttcccactcccgcaaagcctgccgctgc
tgcctgctggttgctcacctgccgcggtacgcgatggcgggggccgcagcggcggccgcg
gtggacgtggaggacctgctggtgcgcgtcaagaccggcgccgaggacgagctcgccgcc
gtggccagggaggtggaagcgctggccggggacggaaggctcggggaggaggacgacgag
gacggcctcctcgtcccggcgctgctcgcgcgcctcgccgccgcgggcaccgctgacgcc
agggtcagcgtcatggccgcgctcaggcgcctcgcgggctgcgtcgccggtgagagcaag
gagaggctggcgagcatcgaggcgctttccagcatagtccgctccctgtccagagacgtt
gacgagaggagggaggcgattgcggtgctgctagacctgtccgacatcccacaggtccgg
cagaggattggcaggatcaaagggtgtatcgtcatgctagtcacgttgaggaatgcgcgt
gaatcaggcaccgaggacgatgcagagaagttgctcagtatcttgtcgtccaacccgcag
aatgtgctgttgatggcggaggctggttacttccggccgttgatacagtacctcaagcaa
ggttctgacatgaacaaggtccttatggccactgctatttcaaaaatgttcctatctgaa
catatgaaatcttccctcggtgaggatggagctattgaacccctcgtggacatgtttaaa
tatggaaaccttgaagccaagcactcagccttaggcgccttgcgtaatctctctagctct
ctacaaaatgcagaactcctgataaattctggcataacaggaccgctgctccagctcctt
ttctctgtgacctcagtgctcatgaccctcagagagccagcctcagctatactcgcagca
atagcacaatctgagcgtattctacttcataaagatgtagcacctcagatactctcgctt
cttaatttatcgagtccggtaattcaacttcatcttctgagggccctaaacagcatttcc
gggcacgccaatgctaaaagagccaggagtaaaattaggaaaaatggaggggtgcaactg
cttctacctttcctaacagaaaagaatgtggatatcaaaattgctgcgttgcacttaatg
ttccatctatcgaaagattcttctcaagaattggctgaacagttcagggagacccatcta
gatatcttggtaaagatcatctcttctcctacttctcgagatgagaaggctgcagctgtt
ggtatcctaagcaacctcccagtgacagataagaaggtaactgagattctgatgcggtca
aacttgcttcctattctgatcaccttgtttgaagcaaacatcgccacttccgtgacacct
caaaggatgtggttgcttgagggcattgccggtgtatttattcggttcacagttacctgg
gacaggaaactacagagttcagcagttggatatggggtggttccttgccttgttaagttg
ctttcggaaggatcagtggacgccaagtctaaagcagcaacatccttggcccaactatca
cagagcacaatggcactgcttaagtcaaaattgccaaggtggctttgtgttccttcatca
gctgaatcctactgtatagtccacagctgccagtgcaccgtcaagagcaccttctgctta
gtaaaagctggcgccgtcaatcctctggtccagatactagaaggcgaagaacgcggagca
gatggagcggtgctggaagcactgggtactcttatgcaggacgagatctgggaaaacggg
agcagggtgatagagaaggcgtcaggcatccatgctctgctgaggatcgccgaagctgga
gagctgagttcccaggacagggcgatatggatgctggagcggatgttccggctcgaagcc
cacagagagcggtacggcgaaatcacgcaggctttgctcatcgaccttgcccagaaagga
gaccctgccctgaaacccatgattggcaagatactggctcaccttgagctgctgcaaaca
caatctagctacttttaa
DBGET
integrated database retrieval system
