KEGG   Sorghum bicolor (sorghum): 8062440
Entry
8062440           CDS       T01086                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 3 isoform X2
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03022  Basal transcription factors
sbi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    8062440
  09124 Replication and repair
   03420 Nucleotide excision repair
    8062440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8062440
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8062440
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     8062440
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     8062440
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 8062440
NCBI-ProteinID: XP_002445862
UniProt: C5YIB4 A0A921QMN7
LinkDB
Position
7:complement(63400981..63407660)
AA seq 193 aa
MVMVSGGGGNAWAKEMTIRRRIASIFNKTQEHFPTLKDYNDYLEEVEDMTFNLIEGIDVE
AIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPVKTEANDTAAGSSQGISGGAG
VQGQYAPAAVLGGVAQPRPTGMAPQLIGSRSDPQGDDEETRRLRAERAARAGGWTAELSK
RRALEEAFSAIFI
NT seq 582 nt   +upstreamnt  +downstreamnt
atggtgatggtgtcaggcggcggggggaacgcatgggcgaaggagatgaccatccgccgc
aggatagccagcatattcaacaagacgcaggaacatttccctactctgaaggattacaac
gattatctagaagaagttgaggatatgactttcaacctgattgaagggatagatgtcgag
gcgattgaagcaaaaattgcaagatatcaacaggaaaatgcggagcagatatacttgtcc
agagctaaaagggcagaagatcttgcagcagcacttaaagcaagcaggatgaaccctgta
aagaccgaggccaatgatacggctgctgggagttctcagggtattagtggcggggcagga
gttcagggccagtatgcacctgccgccgttcttgggggagtggctcagcctcgccccaca
ggtatggctccccaactaatcggcagtcggtcagaccctcaaggagatgacgaggagacc
aggagactacgcgcagagcgagcagcacgagctggcggatggactgctgagttgagtaag
agaagagcgctggaggaggcgtttagcgccatatttatctag

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