Sorghum bicolor (sorghum): 8062538
Help
Entry
8062538 CDS
T01086
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8062538
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
8062538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
8062538
NCBI-ProteinID:
XP_002459833
UniProt:
C5X5X4
A0A921RMK9
LinkDB
All DBs
Position
2:19834763..19841312
Genome browser
AA seq
965 aa
AA seq
DB search
MIAEKPSWIRHEGLQMFSIDIQPGGLRFATGGGDQKVRIWSMKSVDKNNTDNDSSQGLLA
TMCDHFGSVNCVRWARHGRYLASGSDDQVILIHERKAGSGRSEFGSGEPPDVENWKVIMT
LRGHTADVVDLNWSPDDSTLASGSLDNTIHIWNMTNGMCTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHKAEGHWEKSLGSTFFRRLAWSPCGHYITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPIVVVKFNNSMFRKNFSNGQDTKVAPAGWANGTSKTSS
KEQQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFSQSVVDLSWSPDGYSLFACSLDGS
VANFHFEAKELGYKLSDSELDELKRSRYGDVRGRQSNLAESPAQLLLEEASAKQSASKKG
TSIVQQFQAPPKVSADVPNPAPVVQSQKAPEALPEAEKKTSGPAADDMSKVTQLSSPVKQ
KEYRRPDGRKRIIPEAVGFPSNQDNIPSRSHNQVVDFSSLDQRMNGIRPSYGSNSNCNNS
GVKDRSGVTARANITESLVIQKALTSDRILSVERTGSVVPGSLTCSALSIHVLDKKGNED
SLPVCLEAKPVEHAAGDMTGVGGAYSTKETEIRCTRGAETLWLDRISAKVTVLAGNANFW
AVGCEDGYLQVYTKCGRRAMPAMMMGSAAIFIDCDDCWKLLLVTRRGLMYIWDLYNRTCI
LQDSLASLVASPDESSANHAGAVKVISAKFSRCGFPLVVLASRHAFLFDMSMKCWLRIAD
DCFPASNFASSFSSPQGGELGKLQVDISKFMARKPIWSRVTDDGLQTRAHLETQLAASLA
LKSPQEYRQCLLSYIRFLAREADESRLRELCESFLGPPMGMLGYASSMDPKNPAWDPDVL
GMKKHKLLREDILPSMASNRKVQRLLNEFMDLLSEYEAAKSKVDPIDVTPAPQPAPEVND
DMVTS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggagaagccaagctggattcgccacgagggcctacagatgttctccatcgac
atccagcccggcggcctccgcttcgccactggcggcggcgaccaaaaggttcgaatatgg
agcatgaaatctgtggataagaataatactgacaatgattccagccaagggttgctagct
acaatgtgtgaccattttggatcagtaaactgtgtgagatgggcaaggcatggccgctat
ctggcttctggatcagatgatcaggttatcctaattcatgagcgaaaagctggttctggg
agatctgagtttggtagtggggaacctccggatgtagaaaattggaaggttattatgacc
ttaagagggcatactgcagatgtggtagatcttaattggtctcctgatgattcaacattg
gctagtggcagcttggataatactattcacatatggaacatgaccaatggtatgtgcact
gctgtcttgagagggcattccagcttggtcaaaggtgttacctgggatcctattggctct
ttcattgcaagccaatcagatgataagaccgttataatatggcgtacaagtgactggagt
cttgctcacaaggctgaaggccattgggaaaaatctcttggttctacattttttaggcga
cttgcatggtcaccatgcggacactacattactacgactcacggcttccagaaacctagg
cattcagcccctgtgcttgaaagaggcgaatggtctgctacatttgactttctagggcat
aacgctcctattgtggtggttaagtttaataattcaatgttccgcaagaatttctcaaat
ggtcaagacacaaaagttgcaccagctggttgggccaatggaacatcaaagacatcttca
aaagaacagcaaccatataatgttattgctattggaagtcaggacagaacaattactgtt
tggacaacagcgagtgcgcggccattgtttgttgctaaacattttttttctcaaagtgtg
gttgatttgtcttggagccctgatggttattcactttttgcatgctccttggatggatct
gtcgccaactttcactttgaagcaaaggagcttggatacaagttaagtgattctgaactg
gatgaattgaagaggagtagatatggtgatgtcagaggacggcaatcaaatctggctgaa
agccctgcacagttactgctagaagaagcatcagcaaagcaatcggctagcaaaaagggg
acttccattgtccagcaatttcaagcgcctccaaaagtttctgcagatgtgcctaaccca
gctcctgttgtgcaaagtcagaaagctccagaagctttacctgaagctgagaagaaaaca
tcaggtcctgctgctgatgatatgagtaaagttactcagttatcaagtccagtgaagcag
aaggaataccggcgtcctgatggccggaaaagaataatcccagaggctgttggatttcct
tccaaccaggataacatacccagccgttctcacaaccaggttgtggatttttcatcccta
gatcagcgaatgaatgggatacgaccatcttatggtagtaacagtaactgtaacaactct
ggagttaaggatcgctctggtgtcacagcaagggcgaacattacagagagtcttgttatt
caaaaggctttaactagtgatagaattttgagtgtagaacgcactggatctgttgttccg
ggctctttgacctgctccgcactttctatacatgtgttagataagaaaggcaatgaggat
tccttgccagtctgccttgaagcaaagcctgtagaacacgctgcaggtgatatgactggt
gtcggtggtgcctattcaacaaaagaaactgagataaggtgtacaagaggagcagaaact
ctttggttggatcgtatatcggcaaaggttactgtcttggcaggcaatgcaaatttctgg
gctgttggctgtgaagatggttacctccaggtttacacaaaatgtggaagacgagcaatg
ccagcaatgatgatgggatctgcagccatttttatagactgtgacgactgctggaaattg
cttcttgtcacaagaagaggtctaatgtacatatgggacctctataacaggacctgcatt
ttgcaggattcattggcttctttggttgcatccccagatgagtcgtcagcaaatcatgct
ggtgcagtaaaggttatatctgctaaattctcaagatgtggttttcccttagttgtcctt
gccagccgccatgcgtttctttttgacatgagcatgaagtgctggttaaggattgctgat
gattgttttccagcatcaaattttgctagctcatttagttccccccaaggtggagagcta
ggcaagttgcaggttgatataagcaagttcatggctagaaagcctatatggagcagggtt
acagatgatggtttgcagacacgtgcccatttagagacccagttggcagcttctttggct
ttgaagtcaccacaggagtaccgccagtgcctcctatcctacatacggtttctggcaaga
gaagcagacgaatctcgtctacgtgagctttgtgagagcttcctaggtcctcccatgggc
atgcttggatatgcgtcatctatggatcccaaaaatccagcctgggatcctgatgttctc
ggaatgaagaagcacaaactcctcagggaagacatacttccatcgatggcatcgaaccgg
aaagtccagcggcttctcaatgagtttatggacctcctatcagagtatgaagctgctaag
agcaaagttgacccaatagatgtcacaccagcaccacaaccagcgcctgaagtcaatgac
gacatggtcacctcgtag
DBGET
integrated database retrieval system