Sorghum bicolor (sorghum): 8062844
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Entry
8062844 CDS
T01086
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8062844
Membrane trafficking [BR:
sbi04131
]
Protein recycling
Others
EARP complex
8062844
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
8062844
NCBI-ProteinID:
XP_002467550
UniProt:
C5WTG6
LinkDB
All DBs
Position
1:complement(59387480..59399075)
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AA seq
1090 aa
AA seq
DB search
MRRDAVPPPTAPSASSSSSSLFSGVGGGEHLFESGPSPLVFLPLLLIQGGGMDLSRVGEK
LLSSVRSARSLGLLPPTPTAPSPRPEVPERAAAAAAAARAIAGLPPHERINLPSNSEDLV
SIYGSNPQGEPVEELEEVFYEEGFDPIKYILQSIPDEGGDATYFDKQSTLRLVQLDKIAE
RLSHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHITSSKNEVSRDLVVNVKSKK
KQALLDVLPVLTELRHALDMQMELETFVEKENYFQAFQLLPEYLQILENYSGLSAVQEMG
RGIEAWLARTIQKLDTHLLGVCQIFNEENYLTVVDAYALMGDVSGMAEKMQSFFLQEVLS
RTHYVLKEMLEEEVGNNTQKNRFTYSDLCVQVPEPKLRPCLLRTLECLFSLMCSYYAIMS
FSSRDKNIDSKGPDLADKNDICQNSNETLVNSGRGQSSAAVTQDGSAAEKSDRASSSEVH
NPDASTSETGSPFYQLRTDATKLVAQTFQRGRRNLWQLATSRLSVLLSSSAVCSTSTYQF
LKNYEDLVIFILAGEAFCGFEASEFRQKLKTVCLNYMVSFHRQNIYALKMVLEKESWTIM
SAEASQIISLAGLTGDGAALCSPTSRSLKLPINCYHGNSTTANSGNEKLGFAAWLEIENP
FSFKLENGSAESPKSNMLFDSSVSNNHGNGKNSSFDEENEDLLADFIDEDSQLPSRIPKT
KFVKGNSSHWKDGDISSQTGSSLSLLRMMDKYARLMQKLEIVNVELFKGISQLFGIFYHY
IYETFGNLDKSQSSKPLPDHQSSRLKAALSKITQDSDQWTKPNNVSYSPSSPLSMNSTFG
QMDVMPTAPPSSMFTSYGLKERCAAAETLSLVARVLNRSRAHLHSVLSKNNSSVVEEFFR
TLVDSVPDLTEHIHRMSARMLLHIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYK
TRLDHGGISKELQHLLLEYGVESLSEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHI
VSSNVRPKLQTVDTFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRL
ETVEKIEAGP
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgacgcggtgccgccacccaccgccccctcagcctcctcctcctcgtcatcc
ctcttcagcggcgtcggcggcggcgagcacctgttcgagtccggccccagcccgctcgtc
ttcctgcccctgctcctgatccagggcggcggcatggacctctcccgcgtcggcgagaaa
ctcctcagctctgtccgctcggcccgctcccttggcctcctcccaccgacgcccaccgcg
ccctctccccgccctgaggttccggaacgagctgcagcggcagcagcggcagcacgcgcc
atcgctgggttgccaccgcatgagaggatcaacctgccgtccaattcggaggacttggtc
tccatctatgggagcaacccccagggcgagccagtggaggagctcgaggaggtgttttat
gaggaggggtttgatccaataaagtacattctgcaaagtattccggacgaaggcggcgat
gccacctatttcgataagcagtctacgttgagattagtgcagcttgacaagattgcagaa
agattatcacaccatgttatgggtcaccatgaagaaatggtgaaggggatgcagttagtg
atggaattagaacaagacttaaaggttgcaaatgtaatctgcatgaatggacgaaggcat
ataacctcttcgaagaatgaggtgtcgagggatctggttgtcaatgtaaaatcaaaaaag
aaacaagctttgctggatgttcttcctgtccttacagagcttcgtcatgctctagacatg
cagatggaacttgaaacttttgttgagaaagaaaattactttcaggcattccaattgttg
cctgaatatttgcaaattttggagaattattcaggcctttctgctgtacaagaaatggga
cgaggtatagaggcatggttggctcggacaatccaaaaattggacactcatttacttggt
gtttgtcagatctttaatgaagaaaactatctaactgttgttgatgcatatgcactaatg
ggtgatgttagtggcatggctgaaaagatgcagagtttcttcttgcaggaagtactctct
cgaacacactatgtcctgaaagaaatgttggaagaggaggttggaaataatacacagaaa
aataggtttacatatagtgatctttgtgttcaagttcctgaacccaaacttcgcccctgc
ttgttgagaaccctagagtgcttattttcattgatgtgctcatactatgctattatgagc
ttttcttcacgagataagaatattgactccaagggcccagatctagcagataagaatgac
atatgtcagaatagcaatgaaactttagttaattcaggaagaggtcaatcaagtgcagca
gtcactcaggatggttctgcagctgaaaaaagtgatagagcatcatcatctgaggtccac
aaccctgatgctagtacatcagaaacgggttctccattctatcagcttagaacagatgct
acaaaacttgttgcgcaaacatttcaaagagggcgaagaaatctttggcagctggcaaca
agtcgcttgtctgttttattatctagttcagctgtttgttcaactagcacataccaattc
ctgaagaattatgaagatctcgtcattttcattttggctggcgaagcattttgtgggttt
gaagctagtgagttccgtcagaagctgaagactgtctgtttgaactacatggtgtccttt
caccggcaaaatatatatgcacttaagatggtactggaaaaggaatcttggacaataatg
tctgccgaagcttcacaaataattagtttagcaggtctaactggtgatggtgctgcactg
tgctctcctaccagtagaagtctcaagttgccaataaattgttaccatgggaattcaact
acagccaactcaggaaacgaaaagctcggatttgctgcttggcttgagattgaaaatcca
ttttcttttaagctagaaaatggatctgccgaatccccaaagtccaatatgctttttgac
tcatcagttagcaataatcatggcaatggaaaaaattcatcttttgatgaagagaatgaa
gaccttctagcggatttcattgatgaagatagtcagttgcctagtaggataccaaaaacg
aaatttgtaaaaggcaattcttcacattggaaagatggagacatttcatcacagacaggc
tcatcactttctttattaaggatgatggacaaatacgccaggctgatgcaaaagctggaa
attgtcaatgttgagctttttaagggtatctcccaactgtttggcatcttttatcactac
atatatgagacatttgggaacctagacaagagtcaaagcagcaagcctttacctgatcac
caatcatctcggcttaaagccgctttatcaaaaataacacaagactctgatcagtggaca
aagccaaataatgtttcatattcaccttcatcccctttgtcaatgaattcaactttcggc
caaatggatgtgatgcctactgcgcctcctagttcaatgttcacctcctatgggttaaag
gagagatgtgcagctgctgaaacattatcattggttgctcgagttttgaaccgatctaga
gcccatctacactcagtattgtctaaaaataacagttctgttgttgaagagttctttagg
acactggtggactctgttccagatttgacagagcacattcacagaatgagtgcacgaatg
cttttgcatattgatgggtatccagataagattgcgaatgctaaatgggaggtgaaggag
cttggaatagagcacaatggatatgttgatttgttattgggtgagttcaaacactacaaa
acaagattggaccatggaggaatttctaaggagctccaacaccttttgctagagtatggc
gtagagagcttatcagaagttttagttgaaggtctctctagagtgaaaaggtgcactgac
gaaggacgtgctttgatgtcacttgacctccaggtactaattaatgggttgcagcacatc
gtatcatcaaatgtaaggccgaagctgcaaactgtggacactttcataaaggcttactat
ttaccggagactgagtacgttcactgggcacggtctcatccagaatacagcaaaagtcag
gtagtcgggttagttaacctggtggccaccatgaaagggtggaaacggaagacgagacta
gaaacagtggagaagattgaggcagggccatag
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integrated database retrieval system
