Sorghum bicolor (sorghum): 8062938
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Entry
8062938 CDS
T01086
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8062938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8062938
03012 Translation factors [BR:
sbi03012
]
8062938
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
8062938
Translation factors [BR:
sbi03012
]
Eukaryotic type
Release factors
8062938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
8062938
NCBI-ProteinID:
XP_002466604
UniProt:
C5WNT1
LinkDB
All DBs
Position
1:complement(9727314..9730264)
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AA seq
437 aa
AA seq
DB search
MSDGQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDVNRYVLKNSATGETVIKHLNKEQEADQSHFRD
PSTNAELEVQEKTSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDELSDDEGVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggtcaggaaactgacaagaacatcgaaatttggaagatcaagaagttgatc
aaggcattggaagctgctagaggcaatggcaccagcatgatctctctgattatgccacca
cgtgaccaaatttcccgtgtgaccaagatgttgggtgatgaatatggtactgcttcaaac
attaagagtagagtcaatcggcaatctgttttagcagccatcacctcagctcagcagagg
ctgaagctgtataacaaggttcccccaaatggacttgttctctacactggaacaattgtt
actgaagatggcaaggaaaagaaagttactattgattttgagcccttcaggcctatcaat
gcatccctgtacctttgtgacaataagttccacactgaagctttgaatgaactcttggaa
tctgatgacaagtttggcttcattgttatggatggtaatggaactctttttggtacactg
agtggcaatactcgtgaagtgcttcacaaattcactgttgatctcccaaagaagcatggt
agaggaggacagtctgctcttcgttttgctcggcttcgaatggaaaaacgtcataattat
gtccgaaagacagctgaacttgctacacagtttttcatcaatccagctaccagtcagcct
aatgttgctggacttatattggctggttctgctgattttaagacagaactgagccaatct
gacatgtttgatcagcgtctccaggccaaaatacttaatgttgttgatgtttcatatggt
ggggagaacggttttaaccaagctattgagttgtcagctgaaattcttgcaaatgtgaag
ttcatacaagagaaaaagctgattggaaagtattttgaagaaattagtcaagatacagga
aagtatgtgtttggtgttgatgacacactcaaagctcttgaaatgggtgctgtggaaaca
ctgatagtgtgggaaaaccttgatgtcaacagatatgtgcttaagaatagtgcaactgga
gaaactgttatcaaacatctgaacaaagagcaagaagctgaccagagtcatttccgtgat
ccgtctaccaatgctgagctggaggttcaggagaaaacctcactcttggaatggtttgcc
aatgagtacaaaaagtttgggtgcacacttgaatttgttaccaacaagtctcaagaagga
tctcagttttgcagaggatttggtggcattggtggcatgttgcgctatcaattggacatc
cgttcttttgatgagctttctgatgacgagggtgtctatgaagactctgattaa
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