Sorghum bicolor (sorghum): 8062955
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Entry
8062955 CDS
T01086
Name
(RefSeq) chloride channel protein CLC-d isoform X2
KO
K05016
chloride channel 7
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8062955
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8062955
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8062955
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8062955
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
8062955
Ion channels [BR:
sbi04040
]
Chloride channels
Chloride channel (CLC)
8062955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
8062955
NCBI-ProteinID:
XP_002464046
UniProt:
C5WNX1
LinkDB
All DBs
Position
1:10096400..10108088
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AA seq
781 aa
AA seq
DB search
MLSGVDHDVPDGIGMARLAWTRLPTADGEEAGPSTSAAADYELLSAAAIESLDYEVIENY
AYREEQAQRSKFWVPYYVMLKWLFSLLIGVGTGLAAIFINLAVENFSGWKYTATFAIIKH
SYFVGFFVYTVFNLALVFSSVYIVTNFAPAAAGSGIPEIKGYLNGVDTPGILLLRTLVGK
IFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSAKYHLNSRWVRIFESDRDRRDLVT
CGCAAGVAAAFRAPVGGVLFALEEVTSWWRSHLMWRVFFTSAVVAVVVRSAMNWCNSGKC
GHFGAGGFIIWDISGGQEDYSYQELFPMAIIGVIGGLLGALFNQLTLYITKWRRTYLHKK
GKRVQIFEACLISLVTSTISFVLPLLRKCSPCPQLETNSGIECPHPPGTDGNFVNFYCSK
DREYNDLATIFFNTQDDAIRNLFSAKTFHEYSAQSLITFLVMFYSLAVVTFGTAVPAGQF
VPGIMIGSTYGRLVGMFVVKFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITN
NLQLLPLIMLVLLVSKAVGDFFNEGLYEEQARLRGIPLLDSRPKQVMRNMTAKDACKNQK
VVCLPRVSRIVDIVSVLRTNKHNGFPVVDRGQNGEPLVIGLILRSHLLVLLQAKVDFQNS
PFPCGPGVLNRHNFSDFVKPASSKGKSIDDIHLTEDELGLYLDLAPFLNPSPYIVPEDMS
LAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKDLLLEEHSNNVMAELQSTSGLAERQNAR
W
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgctctccggcgtcgaccacgacgtccccgacggcatcgggatggcgcggctcgcgtgg
acgcgcctccccaccgctgacggggaggaggcaggcccctccacttccgcggcggcggac
tatgagctcttatccgccgccgccatcgagagcctcgactacgaggtcatcgagaactac
gcgtaccgggaggagcaggcgcagcggagcaagttctgggtgccctactacgtcatgctc
aagtggctgttctctctgctgatcggcgttggtactggattagctgctatattcataaac
ctggctgttgagaacttctctggatggaaatatactgcgacatttgctataataaagcat
tcatattttgtgggattcttcgtgtacacagttttcaatttagccctggtcttctcttct
gtatatatagtcacaaactttgctccagcagctgctggatctggtattccagagatcaaa
ggttacttaaatggagtggatacacctggaatcctccttttgaggacattagttgggaag
atatttgggagcattggatcagttggaggtggattggctctagggaaagaagggcctctt
gttcatactggggcctgcattgcttcgcttcttggacaaggtggatctgcaaagtaccac
ttgaattctaggtgggtacggatttttgaaagcgatcgtgataggcgagaccttgtgaca
tgtggatgtgcagctggagttgctgcagccttcagagctcctgttggtggggtactattt
gccttggaggaagttacatcctggtggagaagtcatcttatgtggagagtattcttcaca
tctgctgtggtggccgttgttgtgcgttcagccatgaattggtgcaacagtggaaaatgt
ggtcattttggagctggaggttttataatctgggacatatctggaggtcaagaagattac
tcatatcaggaactgttccctatggcaattattggtgttattggtggacttcttggggca
ttatttaaccaacttaccctgtatataactaaatggcggcgaacatatcttcataagaaa
gggaaacgagtccaaatctttgaagcctgccttatatctttggtaacatccacaatttcc
tttgtgttgccattactgaggaaatgcagtccatgccctcagttagaaactaattctggc
atagaatgccctcatccacctggcacagatgggaattttgttaatttctattgttcaaaa
gatagagagtacaatgatctagcaaccattttcttcaatactcaggatgatgcaatacgt
aatcttttcagtgcaaaaacattccatgaatacagtgcacaaagcttgattaccttcctg
gtcatgttttattccttagctgttgtgacatttggaactgcagttccggctggccagttt
gtcccaggaataatgattggatctacatatggaaggcttgttggaatgtttgttgtcaag
ttctataagaaactaaacatcgaggagggcacgtatgcactccttggtgctgcatccttt
cttggaggttcaatgagaatgactgtatctttatgtgttatcatggttgagattacgaac
aacttgcaactcttgccattgatcatgcttgttcttctagtttctaaggcggttggtgac
ttctttaacgaagggttatatgaagagcaagcccgattaaggggcatccctctactggac
tccaggcctaagcaagttatgagaaatatgactgcaaaggatgcgtgcaagaatcaaaag
gttgtctgcctaccacgtgtttcaaggattgttgatatcgtttccgttttgcgtaccaac
aagcataatggtttccctgttgttgaccgtgggcagaatggtgagccacttgtcataggt
ctcatacttcgtagccacttattggtacttctacaagcgaaagtagatttccagaacagt
cctttcccatgtggaccaggcgtactgaacaggcacaattttagtgactttgttaaacca
gcatcaagtaaaggaaagtcaattgatgatattcatttgacagaggatgaactggggctg
tatttggatcttgccccatttttaaatccttcaccatacatagtgccagaggacatgtca
ttggcaaaggtgtacaatctcttccgtcagcttggattgagacatatatttgttgttcct
aggccttctcgtgttgtaggattgataaccagaaaagatttattacttgaggagcatagc
aacaatgtgatggcggagctccaatcgacgagtgggcttgctgaacggcaaaatgctcgg
tggtaa
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