Sorghum bicolor (sorghum): 8063215
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Entry
8063215 CDS
T01086
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8063215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8063215
03036 Chromosome and associated proteins [BR:
sbi03036
]
8063215
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
8063215
Coactivators
SAGA/TFTC/STAGA complex
8063215
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
8063215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
8063215
NCBI-ProteinID:
XP_021319955
LinkDB
All DBs
Position
1:61653487..61667104
Genome browser
AA seq
901 aa
AA seq
DB search
MDPIMKLLEDDEDESLHSGADVEAFTAALNREVEASASASASTSTSTSVPAGSSCSSSQH
TDHGSGLLPQEHKSLLNHGHGQWQDPVKNEIVNQESQQQEQTHALRNDQPSRPEMVSQGS
NNNPLTTNTPKECDLLKAKQEPGTTSQQGTVAQQQPMQQMKSEQTPIITQQQSMQQMKSQ
QTPGTNQTNSATTTAKAPVVTFHMLIPILRRYLDKDRDMQVQSIFAKLRKNEVSKEHFLK
VVRNIVGDKLLKQAASQYQMQHTAQAQRSAQTNPSNYSLSGQVSGQQTVPSGSMTGDEQK
GYPGAHTTPMKQAIDSTRPPQFRPSSSGQMQSNTGYPPSQTNLHKPNEMGNMSDGKGVHM
LQSRPPNNSIPVQTMQHHVQRPQTSSPVFGANSIHARPFPRPVGGPAAPFRPQMADSNPR
AQLVQGAVATVAGSVPTRSIVSGNVPSNQSTRQQSANKEQKTNSFAPSVHMNKETVSQNS
ESSQNSFAAMHAKQVNQALGSSKVGAGTESQSPQLSAPKPLTTTSLSQTQSHGIQEEAKI
QIQSSVQAPPAAASKTPQRKATSGQKKPLEALGSSPPPSSKKQKVSGGFHEQSIDQLNDV
TAVSGVNLREEEEQLFSGPKEESRVSEAARKVVQLEEEKLILRKGPLTQKLAVIMSKCNL
KVIGTDVERCLSMCVEERLRGFISSIIRFSKQRVDVEKSRHRFYPLSSDVRSHIMRVNRE
AREQWEKKQAEDAERIRKQNDGDGNANVDLEKDKNETRGLSKHAKTYKEDDDKMRTTAAN
VAARVAAGGDDMLSKWQLLAERNKQRSEGGDGSSGSIPGNMLQHRPSLKSGKDSREEQEV
EKRGYSTMLGSGGVRRSSLTKVVRSVSIKDVVAALEREPQMSKSSLLFRLYGRPLTEPSA
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatcatgaagctactcgaggacgacgaggatgagagtctgcactcgggtgcc
gacgtcgaggccttcacggcggcgctgaaccgcgaggtggaggccagcgccagcgccagc
gccagcaccagcaccagcaccagcgtccccgccggctcctcctgctcctcgtcccagcac
acggatcacggttccggacttttacctcaggaacacaagtcactattaaaccatggtcat
ggtcagtggcaagatccagtaaagaatgaaattgtaaaccaggagagccagcaacaggaa
cagacacatgcacttagaaatgatcagccgtcaagacctgaaatggtttctcaaggttct
aataacaacccccttaccactaatacaccaaaagaatgtgatttactgaaggcaaagcaa
gagcctgggaccacatctcaacaaggtactgttgctcagcagcagcctatgcagcaaatg
aagagtgaacaaacaccaattatcactcagcagcaatctatgcagcaaatgaagagtcaa
caaacaccaggcacgaaccaaacaaatagtgcaactacaaccgcaaaagccccagtcgtt
acatttcacatgttaattccaattttgagacgttaccttgacaaagacagggatatgcaa
gtgcagtccattttcgccaagttgcggaaaaatgaagtcagcaaggaacacttcttaaaa
gttgtaaggaatattgttggtgataaattgcttaagcaagctgcttcacaatatcaaatg
cagcacactgctcaggcacagcgaagcgctcagacaaatccaagcaactattctttatca
ggtcaagtttctggtcagcagactgttcccagtggttctatgacaggggatgaacagaag
ggatatccaggggctcacaccacccctatgaaacaagctattgacagcactcgaccacct
caatttcggccgtcctcgtctggccaaatgcagagtaatacgggttatccaccttcacaa
accaatttgcataagcctaatgaaatgggaaacatgtcggatgggaaaggggtgcatatg
ctacaaagtcgtccacccaataactccataccagtacaaacaatgcagcatcatgtgcag
cgtccacagacatcctcaccagtgtttggagcaaatagtattcatgcacgtccatttccg
cggccagttggaggtccagctgcaccatttagaccacaaatggcagattccaatccaaga
gcacaattggtccagggagctgtggccacagtagctgggagtgtgccaacgcgatccata
gtgtctggaaatgtgccaagtaatcaatctactaggcaacaatcagcaaacaaggagcaa
aaaactaattcttttgctccatcagtacatatgaataaggaaactgttagccaaaactct
gaatcttcacagaattcttttgctgcaatgcatgcaaaacaagtcaatcaagccctggga
tcttcaaaagtcggtgctggcacggaaagccagtcaccacaattgagtgcgcctaagcct
ttaaccacaacaagcttaagtcagactcaatctcatggcattcaagaagaggctaaaatt
cagatccaatcttctgtgcaagcacctcctgcagcagcttctaaaacaccccagaggaag
gcaacttctggacagaagaagcctttggaagcattaggctcatcccctccaccatctagc
aaaaagcagaaggtatctggaggtttccatgaacaaagcattgaccagcttaatgatgtc
actgcagttagtggtgttaatctgagggaagaagaggaacaacttttctctggtccaaag
gaagagagtcgagtttcagaagctgctcggaaagttgttcaactagaagaagaaaagctc
attctacggaagggacccctgacccaaaaattagctgtaatcatgagtaaatgtaatttg
aaggtcattggcactgatgtggaacgctgtctgtccatgtgtgtggaggagaggttacgg
gggtttataagcagtataataaggttctcaaaacagagggttgatgttgaaaagtcaagg
catcgtttttatccgttatcttcagatgttcgcagtcatattatgagggtgaaccgagaa
gcaagagaacagtgggagaaaaagcaggctgaagatgctgagagaattaggaagcaaaat
gatggagatggcaatgcaaatgttgatctagaaaaagacaaaaacgagactcgtggttta
tcaaagcatgcaaagacttacaaggaggacgatgataagatgcgaactacagctgcaaat
gttgctgcacgagttgcagctgggggagatgacatgctgtcaaagtggcaattgctagct
gaacgaaataagcagagaagtgagggaggtgatggttcttctggctctataccaggtaac
atgttgcaacacaggccatcactgaaatctgggaaagactcgagggaagaacaggaagtt
gaaaagagaggctactccacaatgcttggatctggtggtgttagaaggtcatcgctaaca
aaagtggtgcggagtgtttccataaaggatgtggtagcagcacttgaacgagagcctcag
atgtcaaaatcctcgttacttttccggctgtacggaaggccattgacagaaccatctgca
aagtaa
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