Sorghum bicolor (sorghum): 8063269
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Entry
8063269 CDS
T01086
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 26
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8063269
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8063269
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8063269
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8063269
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8063269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
8063269
NCBI-ProteinID:
XP_002442145
LinkDB
All DBs
Position
8:46690652..46709770
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AA seq
1062 aa
AA seq
DB search
MNRPNTRHKNKRPRSDESNSPSAAVFKKIHSDGDISKSDIRQLYMVWKLPCYGCHGNTKD
SPNCFCGLIPATNGVRKTGLWQKMQEIIRALGSNPSRDLRDSTDTPAGLTNLGATCYANS
ILQCLYMNISFRTGIFSLELEVLKKHPVLDQLSRLFAQLHSSKMAFIDSAPFIKALELDN
GVQQDSHEFLTLFLSLLEQSLSHSKVPGARTIVQHLFCGRVSHVTRCSSCGKDSAASSKM
EDFYELELNIKGLNTLEESLNDYFSEEALDGENQYFCESCQKRVDATRCIKLRSLPPVVN
FQLKRYVFLPKTTTKKKISSTFSFPRQLDLGKRLSNPSSSCTYDLAAILVHKGTGANSGH
YVAHIKDESNGQWWEFDDETVSKLGVNPFGEKPGKASNKVDHKAQGISTAVLSQXXXXXX
XSTDAYMLMYKCTTKDDNATENNKIVEINNDSLPQHLLDEINELNVSYVKSCEEYQSKKD
SHLRYVNERRQEVKSVLAAAPADPEDDSYFWISTDWLRQWADNTTPPSSIDNGPIQCKHG
KVPASKVTSMKRLSSVAWEKLYLKYGGGPTLSSDDFCMECLKDGAKNAVSADVYRERKAS
LKNLAEAALSGNCPDGPSYFISKTWLTHWLRRKNSDIPSDADNGPTSALRCCHGDLLPEH
AAGAKRVSVPENLWLFLYETMNEKKADDIVTFPSDCQPCEICSQELSDVASVEGNLRAVK
VKQRQKHEKLATGKSFTLHPGQKYFLVPSSWLSEWRAYITATGKNISSLPEPHSLEEVVS
SLICEKHSRLLQRPLDLVCKRGSITQKMSNTDGLTVIPEYDWKLFSEEWSARPEKGISAE
IAFSKSSQDKLHGPSEATAIVDGDRGKSLDDTNDDLGASEPYIRTDPEVCEECIGERESC
ALVEKLNYQNEDIHVYFVRGKEAPKSIKEACSKAAVVADRRTSKRSRRASSGNSISLKVS
GSTSIYQLKLMIWESLGIVKENQKLHKGSDEIEDDLATLADKGVFPGDILWVRDSEIYEN
RDIADEISEQKADMLQVEEGFRGTLLTSGVSVQFCQDITFSE
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaataggcccaacactcgccacaagaacaagaggccgcggtctgatgaatccaatagc
ccgtctgcggctgttttcaagaagatacactctgatggcgatatctcaaagagcgatatc
cgccagctttacatggtgtggaaactgccttgctatggctgccatgggaataccaaggac
tctccaaattgtttctgtgggttgattcctgctaccaatggggttcgcaaaaccggcctc
tggcagaaaatgcaggaaattatccgcgctcttggctctaatccatccagggacctccgt
gattccactgatacgcctgctggattgactaacctgggtgcaacctgttatgcaaatagc
atacttcagtgcctttacatgaatatatccttccgcacaggaattttctctttagagctg
gaagttttgaagaagcatcctgtcctggatcagttgtcacggctgtttgcacagctacac
tctagcaaaatggctttcattgattccgcaccttttattaaagcgctggaattagacaat
ggtgtccaacaggacagccatgaatttctcaccttgttcctgtctctgcttgagcaatcg
ttaagtcattccaaggttcctggagctagaacaattgtgcaacatctgttttgcggccgt
gtatcacacgtgacaaggtgctcatcatgtggaaaggattctgcagcatcttcaaaaatg
gaagacttttacgagctggagttgaatattaaaggtttaaatactttagaagaaagtctt
aatgactactttagtgaagaagcactggatggggagaaccaatacttttgtgagtcatgt
cagaaaagggtagatgccactcgctgcataaaacttcgatcacttcctccggttgtcaac
tttcagctaaagcgctatgtattcctcccgaagacaacaacaaagaaaaagatttcttca
acgttcagtttcccgagacagcttgatttgggaaaacggttgtcaaacccttcatctagt
tgtacttatgacctggctgctattttagttcacaagggtactggtgctaatagtggacac
tatgttgcacacataaaagatgaaagcaatgggcagtggtgggagtttgatgatgagact
gtatccaaactcggtgtgaacccgtttggcgaaaaacctggaaaggcgtcaaataaagtt
gatcataaggcccaaggtatctccacagcagttctctcacagnnnnnnnnnnnnnnnnnn
nnatctactgatgcttatatgctgatgtacaaatgtaccactaaggatgacaatgccaca
gaaaacaataaaattgtggaaataaataatgattcacttccacagcatcttcttgatgaa
attaatgaactaaatgtatcatatgtgaaatcgtgtgaggaataccaaagcaagaaggac
agtcatttgagatatgtaaacgagaggcgtcaagaagtaaaatctgttctggcagcagca
cctgctgatccagaggatgattcatatttttggatctcaacagactggcttcggcaatgg
gcagataacactactcccccctcttccattgacaatggtccaattcaatgcaaacatgga
aaggttccagcatctaaagtcacatcaatgaagcgactatcatctgtagcttgggaaaaa
ctatatttgaagtatggagggggaccgacattgagcagtgatgatttttgtatggagtgt
cttaaagatggggcgaaaaatgcagtatctgctgatgtctaccgtgaacgaaaagcatca
ttgaaaaaccttgcagaagcagcactttctggtaattgtccagatggtccttcttacttt
atctcaaagacatggttgactcattggctgcggaggaaaaattcagatatcccttcggat
gcggataatggaccaacaagtgctttaagatgttgccatggggatcttctgccggagcat
gctgcaggagcaaagcgagtatccgtaccagagaacctctggttatttctctatgaaaca
atgaacgagaagaaggctgatgatattgtgacttttccatcagattgtcaaccatgtgaa
atttgcagtcaggaattgtctgatgttgcatctgtggagggtaatcttagagcagtgaaa
gtaaagcaacgacagaaacatgaaaagttggcaactgggaaaagctttacacttcatcct
ggtcaaaaatattttttggttccttcatcatggttgtcagaatggagagcttatattaca
gccactgggaaaaatatttcttcgttaccagaacctcatagtttggaagaagttgtcagt
tcacttatatgtgaaaagcattcaagattgctgcaaaggcctttggatcttgtctgtaag
cgtgggagcatcactcagaaaatgtcaaatactgatgggttaacagtaatcccagagtat
gattggaaattattctccgaggagtggagtgccagacctgaaaaaggtatatctgctgaa
attgctttcagcaagagctctcaagacaaattgcatggaccatctgaagcaacggcaatt
gtggatggagatcgaggcaagtctcttgatgacacaaatgatgatttgggagccagtgaa
ccctatatcagaactgaccctgaggtttgtgaagaatgtattggagaaagagagagctgt
gcattggtggagaaacttaattatcagaatgaagacatccatgtttattttgtccgtggg
aaagaagcaccaaagtctattaaagaagcatgtagtaaagctgctgttgtagcagatcgt
cggacttcaaagcgttcccggagagcaagctctggaaattcaattagtttgaaagtctct
ggttctacatccatctatcagttgaaactcatgatatgggaatctttagggattgttaag
gagaaccagaaacttcacaaaggctctgatgaaattgaagatgaccttgctactcttgct
gataagggtgtttttcctggggatattctttgggtcagagactctgaaatctatgagaat
cgtgacatagcagatgaaatttcagaacagaaggctgatatgctacaggttgaggaaggg
tttcgaggaactctgttgacatcaggtgtctctgttcagttttgtcaggacataacattt
agtgaatga
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