KEGG   Sorghum bicolor (sorghum): 8063283
Entry
8063283           CDS       T01086                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8063283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8063283
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8063283
Spliceosome [BR:sbi03041]
 Complex B
  Other components
   Prp19 complex
    8063283
 Complex C
   Prp19-CDC5 complex
    8063283
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    8063283
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 8063283
NCBI-ProteinID: XP_002442159
UniProt: C5YNT7
LinkDB
Position
8:47545480..47560340
AA seq 986 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEANDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRHRKRKRKGIDYNAEIPFEKRPPPGFYDTVGEDRPLEHVQFPT
TIEELEGKRRADIEAQLRKQDIARNKILQRQDAPAAIMQANKLNDPEAVTKRSKLMLPPP
QISDHELEEIAKMGSAGDPALADELGEGSTATRTLLASYSQTPRLGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKEIQTPNPMATPLASPGPGV
TPRIGMTPSREGHSFGLTPRGTPFRDELRINEEVEMQDSTKLELRRQAELKKSLRSGFAS
IPQPRNEYQIVMPPITEDEAEEAEEKIEEDMSDRLARERAEEQARQEALLRKRSKVLQRS
LPRPPAASVEIIRQSLIRSGESRSRSTFVPPTSLEQADELINEELLRLLEHDNAKYPLDE
KTQKEKKKGKRQQNGGALVPEIDDFDEDELKEASSMVEEEIQYLRVAMGHENESFEDFVK
AHDACQEDLMFFPTNNSYGLASVAGNADKISALQNEFETVKKRMDDEAKKASRLEQKIKL
LTQGYQVRAGKLWSQVQDTFKQMDTAATELECFQELQKQEHLAASYRILNLTEEVNKQKA
LERTLQSRYGELVSGFQRIQEQLEEHKKQLKVQEAIEAENRAQEEEVVAPNHAAVEEEDE
RKPLSSDEKSQQTNRATDEEAAGSKAITKDQMDVDSGNVDGGFVGPIPPAPDTEGDNDEV
SVQDNTSNTESSECASTNDGADKIDQAKLEGQDKADDSMAADAGPQEGKDELAPVGASIS
EENTTISLDQAVSKEDEGSAPERSIV
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgaggatcatgatcaagggaggcgtgtggaagaacacggaggatgagatcctcaaggcg
gccgtgatgaagtacggcaagaaccagtgggctcgcatctcgtcgctgctcgtccgcaag
tccgccaagcagtgcaaggcccgctggtacgagtggctcgacccgtcaatcaagaagact
gagtggacaagggaagaggatgagaagctacttcatcttgctaaactcatgcctactcag
tggaggacaattgcacctattgtaggtcgaacaccatctcagtgtcttgaacgttatgaa
aaattgcttgatgctgcatgtgcaaaggatgaaaattatgaggctaatgatgaccctagg
aagctgcggcctggtgaaattgacccaaaccctgagtcaaagcctgcacgtcctgatcct
gttgatatggatgaagatgaaaaagaaatgctttctgaggctagggctcgcttagctaac
actaggggtaaaaaggcaaaacggaaggcaagagagaaacaacttgaagaggcaagacgg
cttgcctcactacaaaaaaggagagagttgaaggcggctggtattgatacacgccacaga
aaaagaaagagaaaggggattgactacaatgccgagatcccatttgaaaagagaccacct
ccaggtttttatgacactgttggtgaagacaggccacttgaacatgtgcagtttccaaca
accattgaggagcttgaagggaagagaagagcagatatagaggcacagttaagaaaacaa
gatattgccaggaacaagatcctgcagcgacaggatgcccctgctgctataatgcaagct
aataaactaaatgacccagaagctgtcacaaagaggtcaaagctaatgctgccgcctccc
caaatttctgaccatgagttagaggagatagcaaagatgggcagtgctggtgatcctgct
ttagctgatgagcttggtgaaggaagtactgccacaagaactttgcttgccagctattct
cagactccaagacttggtatgacaccattgcgaactccgcaacgaactccagctgggaag
ggtgatgcaattatgatggaggcagaaaatcttgcacgtcttagagaatcacaaacacct
ctgttaggaggtgacaacccagagcttcatccatcagatttctctggtgttacaccacgt
aaggagatacagacaccaaatccaatggcaacacctttggcaagccctggacctggtgtt
actccaaggattggtatgactccatctagagaggggcacagctttggtttaacaccaaga
ggaactccttttcgtgatgaactgcgcataaatgaagaagtggaaatgcaggacagcact
aaacttgagcttcgtaggcaagctgaactgaaaaaaagcctgcgatctggttttgcttct
attccacagccaaggaacgagtaccagatagtcatgccacctattacagaggatgaggca
gaagaagctgaagagaaaattgaagaggacatgtcagacagactggcacgagaaagggct
gaggaacaagctaggcaggaggcattgctcagaaagagatccaaagtgttgcagaggagt
ctgcctaggccgcctgctgcttcagtagaaattatccggcaatctcttattagaagcgga
gaaagcagaagcagaagcacctttgtgcctcctacatcacttgaacaagctgatgaacta
ataaatgaggagctccttaggcttcttgagcatgataatgcaaaatatcctcttgatgaa
aaaactcaaaaagagaaaaagaaagggaagcgtcagcaaaatgggggagctcttgtccct
gaaattgatgattttgatgaagatgaactaaaagaggctagttctatggttgaagaggag
attcaatatcttcgagtggccatgggtcatgaaaatgaatcttttgaggactttgtgaaa
gcacatgatgcatgccaagaggaccttatgttttttcctactaacaatagctatggttta
gctagtgttgctggaaatgctgataagatttctgctttgcaaaatgagtttgaaactgtg
aagaagcgaatggatgatgaagctaagaaggcttctcggcttgagcagaagattaagctt
ctgacacaaggatatcaggtacgggctggaaaactgtggtcacaggtccaagatacattc
aagcaaatggacactgctgcaacagaactcgagtgcttccaagagctgcagaaacaggaa
catcttgctgcttcgtatcgaatcctaaatttgactgaagaagtgaataaacagaaagca
ctagaaaggaccctccagagccgctatggtgagctggtttctggttttcagaggatacaa
gaacagcttgaggagcacaagaagcaactcaaggtacaggaggcaatagaagccgaaaat
cgtgctcaggaagaggaagttgtggcaccgaatcatgctgctgttgaggaagaggatgaa
aggaagcctctcagctctgacgagaaatcacagcagacaaatagagctactgatgaagag
gctgcaggaagcaaggcaatcaccaaggatcagatggatgtggacagcgggaatgtagac
ggtggatttgtagggcctatcccaccagcaccagacactgaaggggataatgatgaggta
tcagttcaagataacacttctaacaccgagagtagtgagtgtgcctccacgaatgatggc
gctgacaagatcgatcaagccaagttagaaggtcaggataaagcagatgacagtatggct
gctgatgctggccctcaggagggcaaggatgaacttgcacctgttggcgccagcataagt
gaagaaaacaccactatatctttggatcaagctgtctcaaaggaggatgaaggcagtgct
cctgagcgaagtattgtttga

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