Sorghum bicolor (sorghum): 8063359
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Entry
8063359 CDS
T01086
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8063359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8063359
03036 Chromosome and associated proteins [BR:
sbi03036
]
8063359
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8063359
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
8063359
PBAF complex
8063359
GBAF(ncBAF) complex
8063359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
8063359
NCBI-ProteinID:
XP_002466552
UniProt:
C5WMX1
LinkDB
All DBs
Position
1:complement(8521213..8526913)
Genome browser
AA seq
905 aa
AA seq
DB search
MEPKPSSAAHGDAPAVEAPRRRGGGGKRKSAGSSFTPSKRQAKERNASFHVPPHLLHSGP
LTRAARQSPHKLAGTPPESGPASSAAATGDGVSGGKAGVDAIRPETAETPAPELPLVDEM
FEAVRSRGAGVHVVPTFAGWFSWKEIHPVEKQTLPSFFNGKSEKRTPEVYLAIRNSIVMK
FHANPQCQLESKDLAEFSIGETDARQEVLEFLDHWGLINFHPFPPAGHEESKPEESQDNS
NDEKASLIEQLFKFESVQSYMMPLPKKEDVGAPPPLPSLFPEPVLIEDVVAAAEPSVEYH
CNSCSVDCSRKRYHCRTQADFDLCCDCYNEGKFDPGMAKTDFILMDSAEVSGASGTSWTD
EETLLLLEGLEIFGGKWAEIAEHVATKTKAQCMLHFLQMQIEDRFHDGEDINQNIPVRTE
QATTEKVIAETSEKMEVEDKAEGRDTADENALEKTEGNCVETKTEDASVVVNKDTQNSGG
KDSGVSPSTEEPKQSSDEQPIVKENSVDVDTSGEKLSNVAIDILKSAFEAAGHSPEYEGS
FADAGNPVMALAAYLTGLMDDDNTTTSFRGSLKAISEVSPALQLASRHCFILEDPPNELK
DICASVSKKNTDGDQPKDEDMIQNSIDTEKKVINEKEDKSLSVEKKNNSSTSQNDHQETD
IKSVSHDDCSLVEPKTNNAKESGDSTAIGDTSATDTTKGNTKQVNDLPSVEVGAPDDSSL
KGKDKLNKTEDAVATPATVQEQKQKQKHSQALENGDKKGPNNIESVIVDEEKGSIVTANQ
NDSITRLKRAAATAVSAAAVKAKFLGDQEEYQIRRLTALMIEKLFQKIEVKMSLFSEIEQ
VVLRTREYTEKTRKKLLMERNAIIAARMGALPSRPNQPGVAGNRLPPGYSNPPVRPPNAM
PRPTS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagccgtcttcggcggcgcatggtgacgcgcccgcggtcgaggccccccgc
cgccgtggcggcggcggcaagcgcaagtcggccgggtcctcgtttacgccgtcgaagcgg
caggccaaggagcggaacgcttccttccacgtgccgccgcatcttctgcacagcgggccg
ctcacccgcgccgcgcgccagtcgccgcacaagctcgcgggcacgccgccggagtcgggg
ccagcgtcgtcggcggccgcaactggggacggggtgagcggcgggaaggcgggggttgat
gcgatccggcccgagacggcggagacgccggccccggagctgccgctggtggacgagatg
ttcgaggccgtccgatcccgtggcgccggcgtccatgtggtccctacctttgctggatgg
ttttcatggaaagaaatccacccggttgagaagcagaccttgccttctttttttaatgga
aaatctgagaagcggacacctgaggtatatttggcgattagaaattcgatcgtgatgaaa
tttcatgccaatcctcaatgtcagctggagtccaaagatctggctgagttttcaatcggg
gagaccgatgctcggcaggaagtcttggaattcttggatcactggggcttgataaatttc
caccctttcccacctgctggacatgaggagagtaagccagaggagagccaagacaattct
aatgatgagaaagcttctttgatcgagcagctgtttaaatttgaatcagttcaatcatat
atgatgcctttaccaaagaaagaagatgtgggagctccgccacctctgcctagcttgttt
cctgaacctgtactcattgaagatgtggttgcagcagctgagccttctgttgagtaccac
tgcaactcctgttcagttgattgctcgcggaagcgctatcattgtcggacccaggcagat
tttgacctctgttgtgattgctataatgaagggaagtttgatccaggcatggccaaaact
gatttcatcctcatggattctgctgaagtttcaggtgctagtggtactagttggactgat
gaggagacgttacttcttttagaaggtttggaaatttttggtggaaaatgggctgagatt
gctgaacatgttgctactaagacaaaagcacaatgcatgttgcactttcttcaaatgcaa
attgaagaccgcttccatgatggcgaagatattaatcaaaacataccagtacgtacagag
caagccacaacggagaaagtcattgctgaaacatctgagaaaatggaagttgaagataaa
gcagaaggaagagatactgcggatgagaatgccttagagaaaacagagggaaactgtgta
gaaacaaaaactgaagatgcaagtgttgttgtaaataaagatactcagaattcgggtggc
aaagattcaggtgtatctccaagcactgaagagccaaagcaatcttctgatgagcagcct
atagtaaaggaaaattctgtagatgtagatacttctggtgaaaaactatcaaatgttgct
attgatatcctaaaatctgcatttgaggctgctggtcacagcccagaatatgaaggttca
tttgctgatgcaggaaatccagttatggcactagcagcgtatttaactggtcttatggac
gatgataacactaccacttcattccgtggttcactaaaagctatatctgaggtgtctcct
gcactccaattagcaagtaggcactgttttattcttgaggacccaccaaatgaactcaaa
gacatttgtgctagtgtaagtaagaaaaatacagatggtgatcaaccaaaagatgaggat
atgattcaaaattcaattgatactgagaaaaaggtgatcaatgagaaagaagataagtct
ttgtctgtggaaaagaaaaacaattcatccacgtcacaaaatgaccaccaagaaacagac
attaagagtgtctcacatgatgactgctccttagtggagccaaaaaccaataatgctaag
gagtcaggtgattcaactgctattggggatacgagtgcaaccgacactacaaaaggtaat
actaaacaagtgaatgacttaccaagtgttgaggtgggggctcctgatgattcatcttta
aaaggcaaggataagctcaataagactgaagatgcagtggcgacaccagctaccgtacag
gaacagaaacagaaacagaaacacagccaagcattggaaaatggtgataagaaaggacct
aacaacattgaaagtgtaattgtcgatgaagagaagggatctatagtgactgccaaccaa
aatgattccataactaggctcaaacgagcagcagccactgctgtttcagcagctgctgtg
aaagctaagtttctcggtgatcaggaggaatatcaaattcgaaggctgacagcacttatg
attgaaaagctgttccaaaaaatagaagtgaagatgtcgttgttttcagagattgagcag
gtggtccttcgaacaagagagtataccgagaagaccagaaagaagctcctaatggaacga
aatgccattattgcagctcggatgggtgcattgccgtctaggccaaaccagcctggtgta
gccggaaacaggttaccacctggatatagcaaccctcctgtaaggcctccaaacgcaatg
ccgcggcctaccagctga
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