Sorghum bicolor (sorghum): 8063580
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Entry
8063580 CDS
T01086
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8063580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8063580
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
8063580
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
8063580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
8063580
NCBI-ProteinID:
XP_002441503
UniProt:
C5YVG7
A0A921U639
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All DBs
Position
9:complement(56958302..56962280)
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AA seq
242 aa
AA seq
DB search
MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKG
QQVNSNEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID
IYVQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLDLNYLEDSAGG
SDVTVGILAKMDKVTLLQMDAKLPMDTFENVMGLAIEGCKAIASYIREVLLENTKKLECQ
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgtgaaccccctcaccggcttccgcgtcgacggccgccgccccaacgagatg
cggcaactcaagggcgaggtcggcatcgttgcacgcgcagacgggtcggcgctgttcgag
atgggcaacaccagagtcatcgctgctgtctacggcccccgagaggttcagaacaaaggt
cagcaagtaaacagcaacgaggctttggttcgttgtgagtataggatggcagaatttagt
acaggagatcggaggagaaaaccaaagggtgacaggcgatcaacagaaatttctcttgtt
attcgacagacaatggaggcaagcatattaacacatttaatgccacactcacagattgat
atatatgtccaagttcttcaagctgatggtggaacaaggtcagcttgcatcaatgcggca
acactagctcttgcagatgctgggattccaatgcgagacattgtcacatcttgtagtgct
ggctatctgtgttctactcctttgctcgatctgaattacctcgaagacagtgctgggggt
tccgatgtcaccgttggcattcttgcaaagatggacaaagtgactttgcttcagatggac
gcaaaattaccgatggatacatttgaaaatgtaatgggacttgcaatagaaggatgcaaa
gcaattgcatcttacatccgagaggtgctattggagaatacaaagaaacttgagtgtcag
cgtggttaa
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