Sorghum bicolor (sorghum): 8063685
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Entry
8063685 CDS
T01086
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8063685
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
90S particles
Other 90S particles
8063685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
NRDE-2
Motif
Other DBs
NCBI-GeneID:
8063685
NCBI-ProteinID:
XP_021308907
LinkDB
All DBs
Position
2:7200801..7219088
Genome browser
AA seq
1911 aa
AA seq
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MAPPRGDRKKGKGAGGKTDLRPDRKQFKGHRKEVAAAEQGDGDGERQQLAAPGSAALLAA
ASDEADFPRGGRSLLSKDEMAEARAEAEQDFEREGKKGKGKRKRRGGESSGFGPDDDLGT
LFGGATTGKLPRYANRITVKNISPNMKLWGVVIEVNQKDIVLSLPGGIRGFVRSEDVCDI
ALQENRKDSENSLCAKVVHVGQLVPCIVLRVDDDKKEGKVNRRVWLSLRLSLLYRGLSLD
GLQEGMVLAAQVKSIEDHGYILHFGVSSFSGFMQKDDKENVKIERRQLMHCVVKAIDKTR
AIVHLSSDEDLLCKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDI
FNLLNSFPSGNWKDDYSKNKKVNARILFVDPSTRAVGLTLNKHLLHLEVPPINLKAGDIY
DKSKVLRVDKKAGLFLEIPSPTPSPGFISIHDVSDKDAKNLEKFKEGSSLRVRILGVRNL
EGVAIGTVKDSAFEGSVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSE
LEHVVKPPKKFKVGAELLFRVLGCKSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGW
ITKIEKHGCFVKFYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINVIPASRKLNV
SFVISHNRVIPIDTPKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHHGQAAQL
KNLLKPGHEFNQLLVLDIEGHNLVLSAKHSLINCANDIPSEISQMHPGVVVHGYICNIIE
SGCFVRFLGHLTGFSPKDKAVDRRIERLSDAFYVGQSVRSHILSVTAETARVKLSLQQSM
CSSTDSSFIQGYFLLDQKIAALKYSSNDWAHTFGIGSLVEGEVGAIEEYGIILNFKDHLD
VVGLIEHHQLGGSSVEVGSSVKGLVLDLSDGVVNLSLKPELIGSVRNVGKKKKRQRAAVA
DLELHEEVNAVVEIIKGSYLVLSIPEYNYAIGFAPLMDYNSQLLPHHHYDNGQRITVVVG
NIPSSDSSGRLILLPKASAQYSALSESKRAKKKSGYKIGSLVEAEIIDIKPLELLLQFGG
NLHGRIHITEVPEKDSDEHPFSKLRIGQKLTARIVAEAEPSGKSGKNFKWELSIRPCIVN
GEFDELTAQKEQKHTTNEIVRAYVVKVDKEWVWLTVSRNVMAHLFVLDSSSEPSELKEFQ
QRFSEGQAVKGRVINVNREKRLLRLKALDNQCTQLNIDEIQQSKSSVFEQTKQGDIIGGR
VQKILPGVGGLVVQIGPHLRGRVHYTEIVDSWVTEPLSGFHEGQFVKCKVLSVSRSSEGS
LRVDLSLRSSNLIRDSNNSGLVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIMI
SRMVEARITLSNLSDEYVENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEKL
DDISYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCYKAGD
MVKAKILKIDEKRHRVSLGMKKSYFDSDLTADTNDDEDDESALMDISVAPQMVEYHNRSL
VNRKAEPMASVPPLQVSLDESECSDLEDNNNNKGPEIANGTEANAKKNDKQLKKEARKQR
ELEISAMEERALQGDVPQTPDDFEKLVRSSPNSSFVWIKYMATLLDLADVEKARAVAERA
LKTIIPREEEEKLNVWVAYFNLENEYGSPREDAVKKVFQRALQYCDPKKLHLALLAMYER
TEQYELADELLDRMTKRFKTSCKIWLCRIQFALKQGKDVACIKSIVNRALLSLPHRKRIK
FLSQTAILEFKCGVPEEGRSRFELILREYPKRTDLWSVYLDQEIRLGDIEVIRALFERVT
CLTLPPKKMQFLFKKYLNFEKSLGEDNERIQFVQQKAIEYVQSSLPSQDNP
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgcgcggcgacaggaagaaggggaagggcgccggcgggaagaccgatctg
cgccccgaccggaagcagttcaaagggcatcgcaaggaggttgcagccgctgagcagggg
gatggcgacggagagcggcagcagttggcagcgccgggttccgctgcgctcctcgccgca
gcttctgacgaagctgacttcccgagagggggacgcagcctcctgagcaaggatgagatg
gcggaggctcgcgcggaggcggagcaggatttcgagagggaggggaagaagggtaagggg
aaaaggaagaggaggggcggcgagtcgtctggttttggcccggacgacgacttggggaca
ctctttggtggcgccaccactgggaagctcccacgctatgctaatcgcatcacagtaaag
aatatttcaccaaatatgaagctctggggtgttgtaattgaggttaaccagaaagatatt
gtgttaagtctacctggtggaattagagggtttgttcgctcagaggatgtgtgcgacatt
gctttgcaggaaaatcgcaaggatagtgagaacagtttatgtgcaaaagttgttcatgtt
ggtcagcttgttccttgtatagtcctacgagttgacgatgataagaaagaaggaaaagta
aacagacgggtttggctatcattgcgattaagtctactgtacaggggactttccttggat
ggcttgcaggaaggaatggtacttgctgcccaagtcaaaagcattgaggaccatggttac
attcttcattttggagtatcctcctttagcggatttatgcaaaaggatgacaaagaaaat
gtgaagattgagcgccgacaactgatgcattgtgttgtgaaggcgattgacaaaactcgg
gctattgttcacttgagctctgatgaagacttgctttgtaaatctattattaaggatctg
aaaggcctttctattgatcatttgattcctgggatgatggttaatgcacgcgtccattca
gttcttgaaaatggagtcatgttatcatttcttacttatttcagtggaacagttgatatt
tttaatttgttgaattcctttccctctggtaattggaaagatgattacagtaagaataag
aaggtaaatgctcgcatcctgttcgttgatccatcaacaagagcagttgggcttacattg
aacaaacatttacttcatcttgaagtaccccctattaatctaaaagctggagatatctac
gataaatcaaaggtgctgagggtagataaaaaggctggtctttttctggaaataccttct
ccaactccatcacctggatttattagtatacatgatgtgtcagacaaggatgcaaaaaac
ttggagaagtttaaggaaggcagtagcttacgtgtccgtatacttggagtacggaatctt
gaaggagttgcaataggcactgtaaaagacagtgcttttgaagggtctgttttcactcat
gatgatgttaaacctggaatgttagtgagagctaaggttgctactgtggagccattcggt
gctattgtacagttttcaagtggtgtgaaagcactttgcccgcttcctcacatgtcagag
ttggaacatgttgtgaaaccaccaaagaaatttaaggttggagctgagcttcttttccgt
gtattgggctgcaaatccaagagagttacagtgacatacaagaagtctctggtgaaatca
aaacttgatgtgctagcatcatatgctgatgcaaaaattggtttagtgactcatggatgg
attactaaaattgaaaagcacggttgctttgtaaaattctacaatggagttcagggtttt
gttagcagatctgaccttggattagaggctggaactgaagcagaaaatgtttatcatgtt
ggtcaagtggtcaaatgtagaattatcaatgtgatacctgcttcaaggaaactaaatgtt
agttttgtcatatcccataatagggttattccaatagacactccaaagttgggtagtatt
gtctctggtgttgtggaacggcttactcctgcagctgttgttgtcagtgtaaatggcttc
tccaaggggacaatactgaatgaacatttggcagaccatcatggtcaagctgctcagttg
aagaatttgctgaaacctgggcacgagttcaaccaacttctagttctcgatattgaaggt
cacaatttagttctttcggcaaagcactcacttatcaattgcgcaaatgacattccttct
gagatatcgcagatgcatcctggagttgtagttcatggttacatctgcaacattatcgaa
tctggatgttttgtccgttttctcggacatttgactggtttctctcccaaggacaaagca
gttgataggcggatagaaaggctttctgatgcgttctatgttggccagtcagttcggagt
catatactcagtgtaactgcagaaactgctagagtaaaactctcacttcaacagtcaatg
tgctcctcaacggattcttcgtttattcaaggatactttcttctggatcagaagattgca
gcattgaagtactcaagcaatgattgggctcacacttttggcattggtagcttagttgag
ggggaggtgggagcaatagaagaatatggtattatccttaacttcaaagaccatctggat
gttgttggcttaatcgagcaccatcagcttggtggcagtagtgtggaagtggggtcttct
gtgaagggccttgttttggatttatctgatggagttgttaatttgtcccttaaaccagag
ctaattggcagtgttagaaatgttggaaaaaagaagaaacgccaaagggctgcagttgca
gacttggagcttcatgaggaagtgaatgcagttgtggaaataatcaaagggagctatttg
gtcctttccatccctgagtacaattacgcaattggttttgcaccactgatggattacaac
tcacaactgcttccccaccaccactatgataatggacaacgcattactgtggttgttgga
aatatcccaagttctgactcttctggaagacttatcctactaccaaaggcttcagctcag
tattctgccctctctgaatctaaaagggctaagaaaaaatcaggctacaaaattgggtca
cttgttgaagcagagattattgatatcaagccgcttgaacttctactgcaatttggtggc
aatcttcatggaagaatccatattactgaggttcctgaaaaggattctgatgagcatccc
tttagtaaactcagaatagggcaaaagcttactgccagaattgttgcagaggctgaacct
tctggaaagagtggcaaaaacttcaaatgggaattgtctattaggccatgtatagtcaac
ggagagtttgacgaattaactgctcaaaaagaacaaaagcacaccacaaatgagattgta
cgtgcttatgtcgtcaaggtggataaggaatgggtctggttaactgtatcaagaaatgtt
atggctcatttatttgtacttgatagttcttccgagcccagcgaactgaaagaattccag
cagcgctttagtgaaggccaagcagttaaaggccgtgttatcaatgtgaatcgggagaaa
agattacttcggttgaaggcacttgataaccaatgcacacagctgaatatagatgaaata
caacaatcaaagtcctctgtgtttgaacaaacaaaacaaggagatatcatcggtggacgt
gttcaaaaaattctacctggcgttggtgggcttgtcgttcagattggacctcatctccgt
gggagggttcattatactgaaattgttgactcatgggtgaccgaacccttgtctggattc
catgagggccagtttgtgaagtgcaaggtcctgtctgtgagccgctcatcagaaggatca
cttcgagttgatctatcactccgttcatcaaacctgatcagagactctaacaactcagga
ctagttgatgatctggcaacctgtacctcccggatcgaaaagatcaaggatctgcttccc
ggaactgagattaagggctatgtgaagaatgttaattccaaaggatgttttattatgatt
tctcgaatggttgaggctaggattactctatcaaatttgtcagatgagtatgttgaaaat
ccgcagaaggatttccctgttggaatgcttgtacacggaagggtcctgtctacggaccca
tcatcagggagagtggaggcatcacttaggaagaccactggttccaaattggaaaagctg
gatgatattagttatagtgatttgcatgttggggatatcattgatggccaagttaagcgg
gttgaatcctttggattattcgttacaattcggagaagtgaactggttggtctgtgccat
gtatcagaactttctgatgaacctgtcgttgatattaactcttgctataaagctggtgat
atggttaaagccaaaattctgaagattgatgagaagcggcatcgagtatcacttggaatg
aagaagtcgtactttgattctgatctgactgctgacacaaatgatgatgaagatgatgaa
agtgctcttatggacatcagtgttgcccctcagatggttgaatatcataatagaagttta
gttaatcgcaaagcagaaccaatggcttctgtgccgcctcttcaggtttccttggatgaa
tctgaatgttctgacctagaggataataataataataaaggccctgaaattgcaaatgga
actgaagcaaatgctaaaaagaatgataaacaattaaagaaggaagcaagaaaacaaagg
gaactagaaatcagtgctatggaggaaagggctttgcagggagatgtaccacaaactcca
gatgattttgagaagttggtcaggagctccccaaatagtagttttgtctggataaaatat
atggccactttgttagatcttgcagatgttgagaaagcacgtgcagtagctgagagggct
ttaaaaacaataatcccaagagaagaagaggagaaacttaatgtttgggtagcatatttc
aatctggaaaatgaatatggtagtccacgggaggatgctgtgaaaaaggtattccaaaga
gccttgcaatattgtgatcccaaaaagttgcacttggctcttcttgcgatgtacgagagg
accgaacagtatgaacttgcagatgaacttcttgacagaatgaccaaaaggttcaaaaca
tcctgcaagatatggttatgccgcattcagttcgccctcaagcaaggcaaggatgttgcg
tgcatcaaatccattgtaaaccgtgcgcttctaagtttgccacataggaagcgcataaag
ttcctctcgcagacagctattctagaattcaaatgtggggtgcctgaagaaggaagatcc
agatttgaactaatattgcgggagtacccaaaaagaacagacctttggagtgtttatctt
gaccaagaaatccgccttggtgacatagaagttatacgggcattgtttgagagggtgact
tgtcttaccctacctccaaaaaagatgcagttcttgttcaagaagtaccttaattttgag
aagtcacttggtgaagacaacgaaagaattcagtttgtgcagcagaaggcaattgaatat
gttcagagttcactgccgtcacaagacaacccttga
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