Sorghum bicolor (sorghum): 8063704
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Entry
8063704 CDS
T01086
Name
(RefSeq) alpha-amylase isozyme 3C
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00500
Starch and sucrose metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8063704
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
8063704
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
8063704
NCBI-ProteinID:
XP_002460331
UniProt:
C5X2B1
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All DBs
Position
2:61762982..61764700
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AA seq
437 aa
AA seq
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MAKHSAAMCSLLVLVLLCLGSQLVQSQVLFQGFNWESCKKQGGWYNYLRGQVDDIAATGA
THVWLPPPSHSVAPQGYMPGRLYDLDASKYGTHAELKSLIAAFHAKGVQCVADVVINHRC
ADYKDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNP
RVQEELSGWLNWLKSDLGFDGWRLDFAKGYSAAVAKVYVDNTAPTFVVAEIWSSLHYDGN
GEPSNNQDADRQELVNWAQAVGGPAAAFDFTTKGVLQAAVQGELWRMKDGNGKAPGMIGW
LPEKAVTFVDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGTPCIFYDHVFDWNLKQEISA
LSAVRSRNGIHPGSKLNILAADGDLYVAKIDDKVIVKIGSRYDVGNLIPSDFHAVAHGNN
YCVWEKSGLRVPAGRHH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcactcggctgccatgtgcagcctcctagtgttggtgctgctctgcttgggc
tcccagctggtccaatcccaggtcctcttccaggggttcaactgggagtcgtgcaagaag
caaggtgggtggtacaactacctccgggggcaggtggacgacatcgccgcaacgggggcc
acgcacgtctggctcccgccgccgtcgcactcggtggcgccgcaggggtacatgcccggc
cgcctctacgacctcgacgcgtccaagtacggcacccacgcggagctcaagtcactgatc
gcggcgttccacgccaagggcgtgcagtgcgtcgccgacgttgtgatcaaccaccgctgc
gccgactacaaggacagccgcggcatctattgcatcttcgagggcggcacgcccgacagc
cgcctggactggggccccgacatgatctgcagcgacgacacgcagtactccaacgggcgc
gggcaccgcgacaccggggccgacttcggcgccgcgccggacatcgaccacctgaacccg
cgcgtgcaggaggagctctccggctggctcaactggctcaagtccgacctcggcttcgac
ggctggcgcctcgacttcgccaagggctactccgccgccgtcgccaaggtgtacgtcgac
aacaccgctccgaccttcgtcgtcgccgagatatggagctccctgcactacgacggcaac
ggcgagccatccaacaaccaggacgccgacaggcaggagctggtgaactgggcgcaggcg
gtgggcggccccgccgcggcgttcgacttcacaaccaagggcgtgcttcaggcggccgtc
cagggcgagctgtggcggatgaaggacggcaacggcaaggcgcctgggatgatcggctgg
ctgccggagaaggctgtcacgttcgtcgacaaccacgacaccggctccacgcagaactcg
tggccattcccctctgacaaggtcatgcagggctacgcctatatcctcacgcacccagga
actccatgcatcttctacgaccatgttttcgactggaacctgaagcaggagatcagcgcg
ctgtctgcggtgaggtcaagaaacggaatccacccggggagcaagctcaacatccttgcc
gctgacggcgatctctacgttgccaagatcgacgacaaggtgatcgtgaagatcggatca
cggtacgacgtcgggaacctgatcccctcagacttccacgccgttgcccatggcaacaac
tactgcgtttgggagaagtccggtctgagagttccagcggggcggcaccactag
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