Sorghum bicolor (sorghum): 8063721
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Entry
8063721 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8063721
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8063721
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8063721
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8063721
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8063721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Peptidase_C98
Peptidase_C12
Motif
Other DBs
NCBI-GeneID:
8063721
NCBI-ProteinID:
XP_021308154
LinkDB
All DBs
Position
2:complement(62182296..62195461)
Genome browser
AA seq
788 aa
AA seq
DB search
MCSKPTTLRCKRCKSAKYCTVKCQIDHWRNGHKDECHPLGQGATQDAPENVMAGPSKEST
NCQKCDDNKDVLYSQFTGKAESVDCSKLSTSSNICKVHDSTICENCCLTAHDQHAGLEPE
QSNKQALGAENDEGLRNLPCIPAVDQVPSTHSSAYCLPSNLLKGEDNPPGPCARPENSGV
MPNNSSKEKNYARQQTTSKAVRNYPTESMLFSYKNFVELYSFNKLELHPFGLYNLGNSCY
ANVVLQCLAFTRPLTAYLLEGHHSQNCSKNEWCFMCELEKVLIEGKHGKSLVSPTGILCH
LNEIGVSFGHGAEEDAHEFLRYAIDKMQSASIKEAKKNGIQQLAEETTLVHFIFGGYLRS
KIKCTKCQVSSKQSERILDLTVEIDGDINTLDGALRRFTSSEVLDGDNRYHCSRCNSYER
AQKKLTILEAPNILTIALKRYQSGVLGETSKVVKFPEHLNLSQYMSRTDDSSPVYTLYAV
VVHHNVSNATVSGHYVCYVKDSQGKWHEMDDNKVKPVSIQKVLSKCAYMLLYARISPRAP
TGARGAMLRQGASSHTKKPKQMTRSGSFPSGGGRYQSSRHQQGGLSKDDAVHDLTYALGT
SDRSSSYPVPPACFSRSNSSSLFSSSDVGSSCTFSSDNTDSTRKSCMEYGHIFGASGYMC
QVSPAVIPEEDKLSYLRQRSSWNPSSSCHDMDEEVGKFARQYQRRYQYQAGRGPRVNSCG
ETTSFSYADQGKYQGSSSHNRTNFGSSSCKLTEERRSTGPAFFLEGRLGRGLSKYFYFTV
QGGLGLGL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccaagccgacgacgctccggtgcaagcgatgcaagagtgccaagtactgcacc
gtcaaatgccagatagatcactggagaaatggtcacaaagatgaatgccatcctctaggt
caaggtgccacacaagatgcacctgaaaatgtgatggctggaccctctaaggaatccact
aactgccagaaatgtgatgacaataaagatgtgctttattctcagtttactgggaaggca
gaatctgttgattgttcaaagctttcaacctcaagtaatatttgcaaagttcatgacagc
actatttgtgaaaattgttgtcttactgctcatgaccagcatgctgggttggaaccagag
caatccaacaagcaagctcttggtgcagaaaacgatgaaggcttaagaaatttgccatgc
ataccagctgttgaccaagttccttccactcacagcagtgcatattgtttgccaagtaac
ctacttaaaggagaagataatcctcctggtccctgtgctaggccagagaactcaggtgtg
atgccaaataattcatcaaaagagaagaactatgccagacaacaaacaacttcaaaagct
gtgaggaattatccaacagaatcgatgcttttttcctacaagaattttgttgagctctac
agcttcaacaagttggaattgcacccatttggtctttacaaccttgggaatagctgctat
gcaaatgttgttcttcagtgcttggcatttacccggccacttacagcatatcttttggaa
ggacatcattcacaaaattgttctaaaaatgaatggtgcttcatgtgtgagttggaaaag
gtcttgatagagggcaaacatggaaaatctctagtgtcacctactggaatactatgtcat
ttgaatgagattggggttagctttggccatggggcggaagaggacgcccacgaatttcta
aggtatgcaattgataagatgcaatctgctagcatcaaggaagccaagaaaaatggtatc
cagcagctagctgaagaaacaactctggtgcactttatatttgggggttatctacgatct
aagataaaatgcacaaagtgtcaagtcagttcaaaacagagtgaacgtattttggattta
actgttgaaatagatggggatatcaatacccttgacggtgcacttcgtcggtttacatct
tcagaagttttagacggtgataataggtaccattgtagtagatgcaattcgtacgagcgt
gcccaaaagaagttgactatattagaggccccgaatatattgacaattgctctgaaaaga
tatcagtctggtgttttgggcgagaccagcaaggttgtcaagttcccagagcacttaaat
ttgtcacagtatatgagtagaacagatgattctagtcctgtatacactttgtatgccgtg
gttgtccaccacaatgtttcgaatgcaactgtgtctggccattatgtatgttatgtcaag
gattcccaaggaaagtggcacgagatggatgataacaaggtgaaacctgtctccatccaa
aaggtcctgtcaaaatgcgcatacatgctgctttatgcaagaatttcaccgcgtgcccca
accggtgcaaggggagcaatgctcagacaaggcgcatcatcacatacgaagaaacccaag
cagatgacacgttcaggatcgtttccttcaggaggaggcaggtaccagagcagcaggcac
caacaaggtgggttgtctaaggatgatgcggtgcacgaccttacatacgcattgggtaca
tctgataggtcatcgtcgtacccggtaccaccggcctgcttcagtcgcagcaacagctcc
tcgctgttcagcagctctgatgtagggtcaagctgcacttttagcagcgacaacactgat
agtaccaggaaatcctgcatggagtatggccatatatttggagcctcgggttacatgtgc
caggtaagcccagcggtcatacccgaggaagacaaactgagttacctacggcaaaggtct
agctggaaccctagctcttcatgtcatgacatggatgaggaggtaggtaagtttgcacgg
cagtaccagcgaaggtatcagtatcaggctggcagagggcctcgtgtaaactcttgtggg
gagaccacatccttctcttacgctgatcaaggtaaatatcagggcagtagtagtcataac
cgtactaattttggtagtagtagctgtaaattaacagaggagcggaggagtacagggccg
gcattttttctagaaggtcgactagggagaggactctccaagtatttttattttactgta
caagggggcttgggcttgggcttatag
DBGET
integrated database retrieval system
