Sorghum bicolor (sorghum): 8064147
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Entry
8064147 CDS
T01086
Name
(RefSeq) KH domain-containing protein SPIN1
KO
K14945
protein quaking
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8064147
Spliceosome [BR:
sbi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
8064147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
8064147
NCBI-ProteinID:
XP_002441276
UniProt:
A0A921U512
C5YZU7
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All DBs
Position
9:complement(53098518..53102546)
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AA seq
285 aa
AA seq
DB search
MDGLHGTDACFSPARAISPQVRPPAGPPDVGSQYLAELLQEHQKLGPFMQVLPICSRLLN
QEIMRVSNIRRQHGAAGDFDRFPPASPNQMHPSPPMPNFCGNGFSPWNGMQSERVGVPQG
AMGWQGPPQSPGSYIVKKILRLEVPTETYPNFNFIGRLLGPRGNSLKRIEASTGCRVFIR
GKGSIKDSGKEEQLKGRTGYEHLSEPLHILIEAELPANVIDARLAKAQEILEELLKPVDE
SQDYYKRQQLRELAMLNSPLREESPHPGGAPPSPFSNGGMKRVKQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctgcacggtacggacgcctgcttctcccccgcgagggccatctcgccgcag
gtgaggcccccggccggcccgccggacgtaggcagtcagtacctggcggagctgctgcag
gagcaccagaagctggggcccttcatgcaggtgctcccaatctgcagcaggctgctgaat
caagaaataatgcgggtgtcgaatatccggcgccaacatggtgctgctggggactttgac
aggtttccacccgcaagccccaaccagatgcatccgtcaccccccatgccaaacttttgt
ggaaacggttttagtccttggaatgggatgcaatcagagagagtaggtgttccacaagga
gctatgggttggcaaggacccccacaaagccctggttcttacattgtcaagaagattttg
cggttggaagtaccgacagaaacataccctaatttcaattttatcggccgtcttcttgga
ccaagaggaaactctttaaagaggattgaagcctctacaggctgtcgtgttttcatcaga
gggaagggctcaattaaagattctggcaaggaggaacaactcaagggaagaactggctat
gaacacttgagcgaacccctccatatcttgattgaagctgagttacccgctaatgtgatt
gatgcaagacttgcaaaggcccaggagatcctcgaagagttgttgaaaccagtggatgaa
tcacaagactactacaagagacagcaactccgagaacttgcaatgttgaattcgccactc
cgagaggagagtccacatccaggtggtgctcctcctagtcccttcagtaatggcggcatg
aaaagagtgaaacaatga
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