KEGG   Sorghum bicolor (sorghum): 8064276
Entry
8064276           CDS       T01086                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X2
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbi03041]
    8064276
Spliceosome [BR:sbi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    8064276
 Complex B
    8064276
SSDB
Motif
Pfam: zf-CCCH RRM_1 RRM_MUD2_C zf_CCCH_4 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 8064276
NCBI-ProteinID: XP_002453991
LinkDB
Position
4:complement(53066166..53072027)
AA seq 748 aa
MSSAVTAGGGAAAADGAPEAAATALTRREKRRERKKERRRRARREAAARARAAAEAEAPA
ATDPEEERRLLEIQEAEAAAESERARLAFEDAERRWLEAAAARAAEKAAAAAAEEEARAA
EASARKEPKDDQGNQSEEDSEWEYVEDGPAEIIWKGNEIIVKKKKVKVPKGSKEKLPVQE
EDRPTSNPLPPQSVAFAAQRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACR
FGVRCSRVHFYPDKSSTLLMKNMYNGPGLALDQDEGLEFTDEEIEQSYEEFYEDVHTEFL
KFGELVNFKVCRNGCFHLRGNVYVHYKSLDSALLAYSSMNGRYFAGKQITCEFVAVTRWK
AAICGDYMRSRYKTCSHGVACNFIHCFRNPGGDYEWADWDNPPPRYWIRKMTALFGPSVD
TMYEKESDTPNFKSSEGSDRKKLKISSNRYVSRGSRDEDVHTRHSQDYSHSKQEHSSHSM
NYEYKRHRRDSSSVDKHRRRDVEDTNGRQFSTMENDSESHRHKHEERHRSDHGNGEKKDD
KTRPRKHCSDRRGSLEPGYSDWPSDFTDTDIRKGSSGEKSTSRYEYDDAKRSRRGSSEYY
NLERHHSTAQKPTGKEHNTKRRSRRDIEDYYHDEKDGGRGKSRKHDRWVATNSDVDSDVD
RYQSSSCKGTRSGRKEDAHPDSEAWHQRSSRSTKDDRRRKRHSGTEEGTSESSSGDLSSD
SGSRRSRSSENFSAHRSKRKRSVGKKSS
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgtcgtcggccgtaacggcgggcggtggcgccgccgccgccgatggtgccccggaggcg
gcggcgacggcgctgacaaggagggagaagcggagggagcggaagaaggagcgccgccgg
agggcgcggagggaggccgcggcgcgcgcgcgcgcggcggccgaggcggaggcgcccgcg
gccaccgaccccgaggaggagcgccgcctcctcgagatccaggaggccgaggcggctgcg
gagtccgagcgtgcgcgcctcgccttcgaggacgccgagcgtcggtggctcgaggctgcc
gctgcccgcgccgcggagaaggccgcggctgctgcggccgaagaggaggccagggctgcc
gaggcttctgctcgaaaggagcctaaagatgaccaaggaaaccagtcagaagaagatagt
gaatgggaatatgttgaagatggcccagcagaaattatatggaaaggaaatgagatcatt
gtgaagaagaaaaaggttaaagtaccaaaagggtccaaggaaaagctgccagttcaagag
gaagatagacctacatcaaatccgctcccaccacagtctgttgcttttgctgctcagagg
agagaaccttctttgtctgctcaagaagtacttgacaaagttgctcaagagacaccgaat
tttggaacagagcaggataaggcccattgtccatttcacctcaagacaggggcttgtcgc
tttggagtgcgctgcagtagggttcatttttaccctgataagtcaagcacattgctaatg
aaaaacatgtataatggtccaggccttgctttggatcaagatgaaggacttgagttcaca
gatgaagagattgaacaaagctatgaagaattttatgaagatgtacatacagaatttctg
aaatttggtgaacttgtgaacttcaaggtatgtagaaatggatgtttccatcttcgagga
aatgtttatgtgcactataaatcgttggattcagctcttcttgcctacagcagcatgaat
ggacgctattttgctggaaagcagataacatgtgaatttgttgccgtgacaagatggaag
gctgccatatgcggtgactacatgaggtcaagatacaagacatgttcacatggagttgcg
tgtaattttattcactgttttcgcaatcctggaggagattatgagtgggctgattgggac
aaccctcctcctagatactggattaggaagatgactgctctttttggcccctcagttgat
actatgtatgaaaaggagagtgatacccccaattttaaaagttcagagggctctgatagg
aagaaactgaaaatttccagcaatagatatgtttcaagaggatctagggacgaagatgtg
catacacgacactctcaagattattcacactctaagcaagaacatagtagccacagcatg
aattatgagtacaaacgacatagaagagattcttcatcagtagataagcaccgaaggaga
gatgttgaagatacaaatggcagacaattttcaaccatggaaaatgacagtgagtcccat
aggcacaagcatgaagaaaggcatagaagtgatcatggtaatggagagaaaaaagatgac
aaaactaggcctaggaagcactgttctgataggcgtggaagtttggagcctggatattcc
gattggccttcagacttcactgatacagacatcaggaagggttcttcaggtgagaagtcc
actagcaggtacgagtatgatgatgccaaaaggagcaggaggggatcgtcggagtactac
aatcttgaaagacaccactctacagctcaaaaaccaacaggaaaggagcacaacactaaa
agacgctcgagacgtgacattgaagattattatcatgatgagaaagatggcggaagaggg
aaatctcgaaagcatgatcggtgggtagccacaaatagcgatgttgattcggatgtagat
agataccagagttcaagctgtaaaggcactaggtcgggaaggaaggaggatgctcatcca
gacagtgaagcttggcatcagaggtcaagtagaagtacaaaggatgacaggagaaggaag
cggcacagcggtactgaagagggtacctcagaatcaagcagtggagatttgagctctgat
tcagggagccgtagatcgagaagcagcgagaacttttcagcacacaggtcaaagaggaag
cgaagtgtgggcaagaagtctagttag

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