Sorghum bicolor (sorghum): 8064287
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Entry
8064287 CDS
T01086
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbi01009
]
8064287
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8064287
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbi04040
]
8064287
Protein phosphatases and associated proteins [BR:
sbi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8064287
Membrane trafficking [BR:
sbi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
8064287
Ion channels [BR:
sbi04040
]
Chloride channels
Chloride channel (CLC)
8064287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
8064287
NCBI-ProteinID:
XP_002454002
UniProt:
A0A921R4N2
C5XUV9
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All DBs
Position
4:complement(53215092..53223871)
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AA seq
817 aa
AA seq
DB search
MDMDGNGNSPRPPPRRPEREGSYNNYDIESMDGGSGAAPPPWRQHNNGSSEALLRYDDGG
ADRGSEARQPLLRKRTMNTTSQIAIVGANVCPIESLDYEVVENDLFKQDWRSRKKKQIFQ
YIVLKWSLVLLIGLLTGVVGFFNNLAVENIAGFKLLLTSDLMLKGRYIGAFFVYGGWNLV
LAAAAAAICAYIAPAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLG
KEGPMVHTGACIANLLGQGGSRKYHLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPV
GGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGLIEFCRSGKCGLFGKGGLIMFDLSS
TVATYSTPDLIAIIVLGIIGGIFGGLFNFLLDKILRVYSIINERGAPFKILLTITISIIT
SMCSYGLPWLAACTPCPVDAVEQCPTVGRSGNYKNFQCPPGHYNDLASLFFNTNDDAIRN
LFSNGTSTEFQMSSLFIFFTAIYCLGLVTYGVAVPSGLFIPVILAGATYGRIVGTLLGSI
SDLDPGLFALLGAASFLGGTMRMTVSVCVILLELTNDLPMLPLLMLVLLISKTIADNFNK
GVYDQIVVMKGLPFMEAHAEPYMRHLVAGDVVSGPLITFSGVEKVGNIVHALRLTGHNGF
PVVDEPPITEAPELVGLVTRSHLLVLLNSKNFMKERFKTSGSFVLRRFGAFDFAKPGSGK
GLKIEDLDFTDEEMDMYVDLHPITNTSPYTVVETMSLAKAAILFRELGLRHLLVVPKTPD
RPPIVGILTRHDFMPEHIHSLFPNLNPHKYHSASMAG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacggcaacggcaactccccgcggccgcctccgcgccggccggagcgggag
gggagctacaacaactacgacatcgagagcatggacggcggctccggggccgcgccgccg
ccgtggcgccagcacaacaacggctcctccgaggccctgctccgctacgacgacggcggc
gccgaccgcgggagcgaggcgcgccagccgctgctgaggaagcgcaccatgaacaccacc
tcccagatcgctatcgtcggcgccaacgtctgccccatcgagagcttggattacgaagtc
gtggagaatgaccttttcaaacaagactggcgatcaagaaagaagaagcagatatttcag
tacattgtcctcaagtggagcttggtgctccttattggcctattaactggagttgttggc
ttcttcaacaatcttgcggttgagaacattgctggattcaaattgctgctcacgagtgat
cttatgctcaaggggaggtatattggagcattttttgtgtatggtggttggaatttagtc
ttggctgcagcagcagcagcaatctgtgcttatattgcacctgctgctgctgggtctggt
attcctgaagttaaagcatatcttaatggggtcgatgcctattctatattagctcctagt
acactctttgttaagatttttggttcaatacttggagtttcagctggatttgtgctagga
aaggaagggcccatggtacatacaggggcatgtattgccaacttgctcggtcagggtgga
tcacgcaagtatcatcttacttgtaactggctacgatactttaagaatgacagggatagg
agagatttgatcacatgtggatctgcagctggtgtggcagctgccttccgtgcacctgtt
ggcggtgttctgtttgctcttgaagaagcagcatcatggtggcgaagtgctcttttgtgg
agaacattctttacaactgctgttgttgcggtggtattgaggggactgattgagttctgt
cgcagtggaaaatgtggtctctttgggaaaggtggattgatcatgtttgatctcagttca
actgttgcaacctacagtactccggatctaattgcaattatagtccttgggataattggt
ggaatatttggaggcctcttcaactttttgttggacaagatcctccgagtttatagtatt
atcaacgagagaggtgctccattcaagatccttctcactataacaatatcaataatcaca
tcgatgtgttcctatggtcttccttggcttgcagcatgcactccatgccctgttgatgct
gtggagcagtgtcctactgttggtcgctcgggcaattataagaacttccaatgcccgcca
gggcattacaatgatcttgcgtcactcttcttcaatacaaatgacgatgccatccgcaat
ctcttcagcaacggcacatcaactgagttccaaatgtcatctcttttcatcttcttcact
gctatttactgccttggactagtgacttacggtgttgctgtcccatctggtctctttatc
cctgttattcttgctggagccacgtatgggcgcatagtgggaactcttcttggatccata
tctgatcttgatcctggcctttttgcccttcttggcgcagcatcttttcttggtggaaca
atgagaatgactgtgtcagtctgtgtgatccttctagagctcaccaatgatctccccatg
ctccctctactcatgcttgttcttctcatatccaaaaccatagcagataactttaacaag
ggagtttatgatcagatagtggtgatgaaaggcttgccattcatggaggctcatgctgaa
ccatacatgaggcacttggttgctggtgatgtggtgtctggcccactaataaccttttct
ggtgttgagaaagtggggaacattgttcatgcattgaggttaactggccacaatggtttt
cctgtggttgatgagccacccataacggaagccccggaactggttgggcttgtgactagg
tctcatctattagttttgctgaacagcaagaatttcatgaaggaacggttcaaaactagt
ggtagctttgttctgcgaagatttggtgcatttgactttgccaaaccaggttcaggcaaa
ggtttgaaaattgaggatctggatttcactgatgaggagatggacatgtatgtggatctc
cacccgatcacaaatacatcaccttacacagtggttgagacaatgtcactagcaaaagcg
gcaatccttttccgggaactcgggttgaggcaccttttggttgtgccaaagacaccagac
aggcctcccatagtcggcattctcacaaggcatgatttcatgcctgagcacattcacagt
ctgttcccgaacttgaatcctcacaagtaccattcagcatcaatggcaggttga
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