KEGG   Sorghum bicolor (sorghum): 8064355
Entry
8064355           CDS       T01086                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03013  Nucleocytoplasmic transport
sbi03015  mRNA surveillance pathway
sbi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8064355
  09122 Translation
   03013 Nucleocytoplasmic transport
    8064355
   03015 mRNA surveillance pathway
    8064355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbi03019]
    8064355
   03041 Spliceosome [BR:sbi03041]
    8064355
Messenger RNA biogenesis [BR:sbi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     8064355
Spliceosome [BR:sbi03041]
 Complex C
  Other components
   EJC/TREX
    8064355
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 8064355
NCBI-ProteinID: XP_002443724
UniProt: C5YLJ8 A0A921QIB2
LinkDB
Position
7:705091..708927
AA seq 159 aa
MAAAGGENSGAGEGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKE
VFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVD
VQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS
NT seq 480 nt   +upstreamnt  +downstreamnt
atggcggcggccggcggcgagaacagcggcgcgggcgagggggagttctacctgcggtac
tacgtgggtcacaagggcaagttcgggcacgagttcctcgagttcgagttccgccccgac
ggcaagctccgctacgccaacaactccaactacaagaacgacaccatgatccgcaaggag
gtcttcgtctccccctccgtcctccgcgaggccaggaggatcatccaggagtccgatatc
atgaaggaggacgatagcaactggcccgaacccgaccgcatcggccgccaggagctcgag
atcgtcatgggcaacgagcacatttcattcaccacttccaagatcggctccctcgtcgat
gtccagtccagcaaggacccggagggcctccggatcttctactacctcgtccaggatctg
aagtgttttgtgttttcactcatcaacctccacttcaagatcaagccaatccagtcttga

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