Sorghum bicolor (sorghum): 8064408
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Entry
8064408 CDS
T01086
Name
(RefSeq) chitinase-3-like protein 1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00520
Amino sugar and nucleotide sugar metabolism
sbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8064408
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
8064408
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
8064408
NCBI-ProteinID:
XP_002450704
UniProt:
C5Y263
A0A921UG76
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Position
5:complement(35003426..35005235)
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AA seq
446 aa
AA seq
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MELAWFIRSSIISLAGFLSVVSASTSQQQCGGIGGPAGVRAGYWSPSSSRYSPVSSIDAS
LYTHLYYSSVSIDEASYAVAPQPTEEEGSLLAAFSGTVKSGSPSTKTMLSIGTNEYRVDA
SNAAFSTMASDKDLRGVFINSSVELARANRFDGLDLSWIFPVTQMDMENLGALLAEWRAR
IMEESATNSLSGPLLLTATLYFSNHMFDMPDGNLDYPIDDISDNLDWANILTFGFHGDSS
VTTADAPLYDKSSHFSVSYGVISWLDAGVPPCKLVMGIPLFGRSWFLRNKAKNGLGSPTA
AAGTKQSKSNQTGIIAYAETEEYLNSESTVVAYDNQSVAEYFYNGDLWVSFDGAQVVQQK
LEFAARSQLLGYFLWTVGFDDSNSTISKKASESWHQYTQGGFGIMHAGGSNQYVAFNSSS
VSLGSWYSKSLSCLLSSVLLLVILFH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggagctagcatggttcatcagatcctcaataatctcccttgctggattcttgtcagtg
gtttccgcatcgacatcgcagcagcaatgcggcggcattggaggacctgctggagtgaga
gctggctactggtcgccgtcctcaagccgctactccccggtcagtagcatcgacgcctcc
ttgtacactcacctctactacagctcagtgtccatcgacgaggcaagctatgctgtcgcg
ccacagccgaccgaagaggagggctcgctgctcgctgccttctccggtaccgtcaagtcc
gggagcccgtctaccaagaccatgctgtccatcggcacaaatgagtacagggtggatgcg
tcgaatgccgccttctccacaatggcttcggacaaggacctccggggagtgttcatcaac
tcctccgtggaactggctcgagccaaccgcttcgacggcctggatttgtcgtggattttc
ccagtcacacagatggacatggagaaccttggagccctgcttgcagagtggcgagcaagg
atcatggaggaatccgccaccaactccttgtctggtcctcttctcctgacggcaacactc
tacttctccaaccacatgtttgacatgcctgacggcaacctcgactacccaatagatgac
atctcagacaacctggactgggcgaatatcctcaccttcggcttccacggggacagcagc
gtcaccacagctgacgcacctctctacgacaagtcgtcgcacttctcagtgagctacggg
gtgatctcatggctggatgcaggagttcctccatgtaagctggtgatggggatacctctg
tttggaagatcatggttcctcaggaacaaggccaagaatgggctaggatcgccgactgcc
gctgccggaacaaagcagagcaaaagcaaccagactgggataattgcatatgcagagact
gaagagtacctgaactctgaaagcaccgttgttgcctatgacaaccaatcagtggcagag
tatttctacaacggtgacctctgggtcagtttcgatggcgcacaggtagtgcagcagaag
ctagagttcgcggcgagatctcagttgcttggctacttcctctggaccgtcggcttcgat
gattcaaacagcacaatatccaagaaagcatcggaatcatggcaccaatatactcaaggt
ggatttggaatcatgcacgcaggaggttcaaaccaatatgttgcatttaattcatcttca
gtatcacttggtagctggtattcaaaatctctcagctgtttgctgtcttcagtacttctg
ttggtgattctgtttcattaa
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