Sorghum bicolor (sorghum): 8064576
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Entry
8064576 CDS
T01086
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sbi03012
]
8064576
Translation factors [BR:
sbi03012
]
Eukaryotic type
Initiation factors
eIF-5
8064576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
MMR_HSR1
GTP_EFTU_D4
GTP_EFTU_D2
ATP_bind_1
Roc
HflX_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
8064576
NCBI-ProteinID:
XP_002442191
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Position
8:49957001..49962698
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AA seq
894 aa
AA seq
DB search
MSSRTTAGSRAAPGGGGGLRKVPASGTTSVPRHVRMIQERLARAREEERRREEEERRAEE
ERRAREEAARQAEVDRRLREEKRRKRQEEAKKRGEREEKLRMEAARRRLGVAVADATGGD
GCGGTQRRPVYESRKSKSLPKRHVNVQSETDLGEALGSEDQLQEKQSNASLEDNGGVVVV
DALEFGEEHITQSSSEESNEIDEDDTWENKSFDGVDSLLHGKSPSFRELEEEQAEEKQVT
SAAPISNPISLSEDIGEDLVSALDGEGQGNGVDMELRAPICCILGHVDAGKTKLLDCIRR
SNVQGGEAGGITQQIGATYIPIENIRERTSLKAEVTIEVPGLLVIDTPGHQSFSNMRSRG
SSLCDIAVVVVDITRGLEKQTMESLDLLKHRNVRFIVALNKVDRLYGWKTFISAPIAKAL
KNQTDDVQREFKWRVTEVITQLMEKGFNAALYYENKKLKQVVNIVPTSAVSGEGIPDLLM
LLVRWVPKIMMERLTYVNTVECTVLEVNEDKDFGTTIDVVLINGALRKGDRIVVCTKQGP
VATNIRYLLTPSPMKELKVKGVYKHHEELKAAQGVKIAVRGLQHAMAGTSLIVVKPGDDM
ERAEAAAMQEISKAISLINGDERGENEDGTEIQEISRIKHCRDGVYVQASSLGTLEAIIK
HLKTLALDVPVSGCNLGPVHKQDVMKATAMLKRKEEYAAILAFDVKVMPEAFELAAESGV
KIFMADTVYKLVDSFTDHINKLKEEMKKQCAADAVFPCTLRILPNRVYHSKDPVVCDVEV
LEGIVKVGTPICVRVPSKDSSADVIHALGRISSMKTSNGMQINSASNGVVSIKIIGENPQ
ERSWVYGRHFNSDNELLSQISRKSIDVLKEHYRDEMSDENWQLICRLKKQLGIP
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaggacgaccgcggggtcccgcgccgcccctggcggcggcggaggcctgagg
aaggtgccggctagtggcacgacatcggtgcccaggcacgtgaggatgatccaggagagg
ctggctcgcgcgcgcgaggaggagaggcgccgggaggaggaggagaggcgcgcggaggag
gagcggagggcgagggaggaggcagcgaggcaggcggaggtggataggaggcttcgggag
gagaagcggcgaaagaggcaggaggaggcgaagaagcgcggggagcgggaggagaagcta
cggatggaggcggcgcggaggcggttgggtgtcgctgttgctgatgccaccggcggtgat
gggtgtggtggcacgcagagaaggcccgtgtatgaatcaaggaagtccaaatcgctgccc
aagcgtcatgtcaatgtccaatctgaaaccgatttgggggaagctctggggtctgaggac
cagttgcaggaaaaacagagcaatgcttcactggaggataatggtggagtcgtcgttgtt
gatgcgctggaatttggggaggaacacattacacaatcttcttcggaagagagcaatgaa
atcgacgaagatgatacttgggagaacaagagcttcgatggagttgattccctgttgcat
ggtaaatctccctcttttagagaactggaagaggagcaagcagaggaaaagcaggtgacc
tctgctgctccaatttctaacccaatcagtttatcggaagatattggggaagatttggtc
tctgcccttgatggtgaaggtcaaggcaatggggttgatatggagcttcgtgcgccgata
tgttgcatccttgggcatgtggatgctggaaagacaaagctgcttgattgtattcggcga
agcaatgtgcagggtggggaggctgggggaatcacgcagcagattggtgcaacctacata
cctattgagaatatcagggagaggacctccctcaaagctgaggttaccatcgaagttcct
ggcttgcttgtaattgacaccccagggcaccagtcattcagtaacatgcgctcgagggga
tcaagtctgtgtgacattgctgtagtggttgttgatattacacgtgggcttgagaagcag
acaatggagtcccttgatcttttgaaacaccgcaatgtgaggtttattgttgccttgaac
aaagttgatcggctatatggttggaagacctttatcagtgcaccaatagcaaaagcgctt
aagaaccaaactgatgatgtacaaagggaattcaaatggagggtaactgaggttataaca
caacttatggaaaagggtttcaatgctgccctgtattacgagaacaagaagctgaaacaa
gttgtcaatattgtcccaaccagcgctgtaagcggtgaaggcattccagacctacttatg
cttctggtgcgatgggtgccaaaaataatgatggagagactgacatatgtcaatactgtg
gagtgtactgtgctggaggtcaatgaagataaggactttggaacaacaattgatgtagtg
ctgattaatggtgcacttcggaaaggtgatcgaattgttgtctgcaccaaacaggggcct
gttgcaaccaatataaggtacttgttgactccttctccaatgaaagaactcaaagttaag
ggagtatacaagcatcacgaggagcttaaagctgctcaaggggttaaaattgcagtacga
gggctgcaacatgctatggcaggcacttctctcattgtggtaaagccgggggatgatatg
gaacgagctgaagctgcagcaatgcaagaaatcagcaaggccatcagcctcattaacggg
gatgaaaggggtgagaatgaagatggaacagaaatacaagaaattagtaggatcaagcat
tgcagggatggtgtatatgtgcaagcatctagtcttggaaccttggaagcgattattaaa
catttgaagactcttgctttggatgttcctgtcagtggttgcaacttaggcccagtccac
aagcaggatgtcatgaaagcaactgccatgctgaagaggaaagaagagtatgcagccatc
ttggcctttgatgtcaaagtaatgcctgaggcttttgaacttgcagctgaatcgggggtg
aagatttttatggctgatacagtatacaagcttgttgatagttttactgatcacattaat
aaattgaaagaagagatgaagaagcaatgtgcagctgatgcagtgttcccatgcaccctt
aggattcttccaaaccgtgtctaccatagcaaggatccagttgtttgtgatgttgaagtt
ctagaaggcattgtcaaggtgggaaccccaatttgtgttcgtgttccaagtaaggatagc
agtgctgatgtgattcatgcccttgggaggatctcatcaatgaaaacatccaatggcatg
cagattaattctgccagtaatggagttgtgtcgataaagataattggagagaatcctcag
gagaggtcctgggtgtatggacgccattttaactctgacaatgagctgctcagccaaatt
tctaggaaatccattgatgtgctgaaagaacactatcgggatgagatgagtgatgaaaat
tggcaactgatctgcaggctaaagaaacaattggggatcccctaa
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