Sorghum bicolor (sorghum): 8064802
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Entry
8064802 CDS
T01086
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.13
KO
K14487
auxin responsive GH3 gene family
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8064802
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GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
GH3_N_vert
Motif
Other DBs
NCBI-GeneID:
8064802
NCBI-ProteinID:
XP_002449599
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Position
5:58096203..58103461
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AA seq
677 aa
AA seq
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MDLTMSTTTMSTSPAVLDHDHGHHRLLSSVSPPTTTTDSPATAMPPRAPSSLPPTIPACD
PHDGPASLQLIEDLTTHAGAIQQRVLREILAMNAGTDYLRGFLGAGAEGRDADELAATFK
DRVPVVEYEDVKPYIERIANGAPSSLISSKTITELLTSSGTSGGQPKLMPSTEEELDRKT
FLYNLLVPVMNKYVEGLDKGRCMYLLFVKPEITTASGLVARPVLTSYYKSRHFRERPDSP
YTRYTSPNEAILCPDSAQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEAHWRALC
DDIRAGRVDASRVTDAACRDAVARVVARPDPALADAIAAECEGSSSSSWRGIVRRLWPRT
KYIDVIVTGSMAQYIPLLEFYGGGLPLVSTMYASSECYFGINLRPLDPPEDVAYTLLPNM
CYYEFIKVEKDGEEAREDGKVVDLVDVEAGGYYELLVTTFTGLYRYRVGDILQVSGFHNA
APQFRFVHRRNVVLSVDTDKTSEDDLLRAVTAAKRLLAPLGGATILSEYTAYADTASIPG
HYVLFWELTPTPPMPGDGDTAARVMAACCAEVEAGLDAVYQRCRSRDRSVGPLEIRVVST
GAFDALMDLCVSHGSSVNQYKTPRCIKHPDAIAVLEARVVGRFFSDTVPHWEPFNVVDTA
AAGAAATTTPSLNEGAT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatctaacaatgtcaaccacgacgatgtccacgtccccagcagtgctcgaccatgac
catggtcaccaccgcctcctctcctcagtctcaccccccaccaccaccacagactcgccg
gcaacggcaatgccaccgcgggcgccgtcgtctctgccgcctactatcccggcctgcgac
ccgcacgacgggccagcgagcctgcagctcatcgaggacctgaccacccacgccggcgcc
atccagcagcgcgtcctcagagagatcctcgccatgaacgccggcaccgactacctccgc
ggcttccttggcgccggcgccgagggacgcgacgccgacgagctcgccgccacgttcaag
gaccgcgtgccggtcgtggagtacgaggacgtcaagccgtacatcgagcgcatcgccaac
ggcgccccctcgtcgctcatctcctccaagaccatcaccgagctcctcacaagctccggc
acgtccggcgggcagccgaagctgatgccgtccacagaggaggagctcgaccgcaagacc
ttcctctacaacctcctcgtccccgtaatgaacaagtacgtggaaggtctggacaaaggg
cggtgcatgtacctgctgttcgtgaagccggagatcacgacggcgtcggggctggtggcg
cggccggtgctgacgagctactacaagtcccggcacttccgggagcggccggacagtccg
tacacgcggtacacgagcccgaacgaggcgatcctgtgcccggacagcgcgcagagcatg
tacgcgcagctgctgtgcggcctggcgcgccgcggcgaggtgctccgcgtcggcgccgtc
ttcgcctccgcgttcctgcgcgccgtcaagttcctcgaggcgcactggcgcgcgctctgc
gacgacatccgcgccggccgcgtcgacgcgtcccgcgtcaccgacgccgcctgccgggac
gccgtcgccagggtcgtggcgcggccggacccggcgctggccgacgccatcgccgccgag
tgcgaagggtcgtcgtcgtcgtcgtggcggggcatcgtgcgccggctctggccgcggacc
aagtacatcgacgtcatcgtgacggggtccatggcgcagtacatcccgctgctggagttc
tacggcggcggcctgccgctggtgtccaccatgtacgcctcgtcggagtgctacttcggc
atcaacctccggccgctggacccgccggaggacgtggcgtacacgctgctgcccaacatg
tgctactacgagttcatcaaggtggagaaggacggcgaggaggctcgggaagacgggaag
gtggtcgaccttgtcgacgtcgaggccggaggctactacgagctccttgtcaccacgttc
acaggtctgtaccggtaccgcgtgggcgacatcctgcaggtgtccggcttccacaacgcg
gcgccgcagttccggttcgtgcaccgccgcaacgtggtgctgagcgtggacaccgacaag
acctccgaggacgacctcctccgcgccgtcaccgccgccaagcgcctcctggcgcctctc
ggcggcgccaccatcctctccgagtacaccgcctacgccgacacggcctccatcccgggc
cactacgtcctcttctgggagctcacgcccacgccgcccatgcccggcgacggcgacacc
gcggcccgcgtcatggcggcgtgctgcgccgaggtggaggccggccttgacgccgtgtac
cagcggtgccggagccgcgaccggtccgttggcccgctggagatccgcgtggtgtccacc
ggcgccttcgacgcgctcatggacctctgcgtctcccacgggtcgtcggtgaaccagtac
aagacgccgcgctgcatcaagcaccccgacgccatcgccgtcctggaggcgcgcgtcgtc
ggcaggttcttcagcgacaccgtgccgcactgggagcccttcaacgtcgtcgacactgcc
gccgccggcgccgccgccaccaccacccccagcctgaacgaaggcgcgacgtaa
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