Sorghum bicolor (sorghum): 8064882
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Entry
8064882 CDS
T01086
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 1
KO
K10523
speckle-type POZ protein
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8064882
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
8064882
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BTB
BACK_BPM_SPOP
MATH_2
MATH
AtaL
Motif
Other DBs
NCBI-GeneID:
8064882
NCBI-ProteinID:
XP_002467204
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All DBs
Position
1:complement(24875135..24878096)
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AA seq
587 aa
AA seq
DB search
MSFAGVSFIGSGGLSGRSTPATAASLVTDSGYHLLVIDGYSRTRETTPNGDCIKSSPFRV
GGHSWCIQYYPNGRVSEVADCIHLALVLDEHNIEEAVKVQFDFSLVDKAEKQLPSNIHET
EVINFSNETPCYGCAFMNRNELEKSELLKDDSLTIKCDIMVIKDVDIDRTGANTAPFVVV
PASDMIQHLSSLLQSTEGSDVTFEIGREIFAAHRCVLACRSTVFKGLLGSMNEGTTAGVV
RIDDMEARVFKLLLGFIYRDSVPEKEAEDDDVMWQHLLVAADRYDLLRLRLICEQKLCTY
INTTTAATILALAERHHGRGLKDACLDFLTRAHANLQEVTVLGGLDHLASTCPLVLKELI
VKLVSPNKKARIDVNTAFVTVPASDMHQHFTHLLQSGEDTDVVFEVSGEKLHAHRCILAA
RSAVFRAELFGPMKEGTTTGVIRINDMEARVFKLMLTFIYSDSMPDINEEEDMEEDEEKD
DDVDDIEVTWQHLLVAADRYDLQRLRLMCENKLCGYINTTKVASILELAEQHHCRGLKEA
CLDFLNFPPNLQQVMAAGGLSHLSSSCPSVLIDLIAKLAYLKPSDEL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgccggcgtatctttcatcggcagtggcggactgtcgggtcgatctacccca
gccaccgcggcctcccttgtcactgacagcggataccacctccttgtgatcgacgggtac
tcacgcaccagagagaccaccccgaacggcgactgtataaagtcttcccctttcagagtc
ggcggccatagctggtgtatccaatactaccccaacggcagagtgtccgaggtggctgac
tgcatacaccttgctctcgtacttgatgagcacaacattgaggaagctgtcaaggtgcaa
ttcgacttcagcttggttgacaaggctgagaagcaactgccatcaaatatccatgaaacc
gaagtgattaacttcagtaacgagaccccgtgttacggttgtgctttcatgaacagaaat
gaactggagaaatcagaacttctcaaggacgacagtctcaccataaagtgcgacatcatg
gtcatcaaggatgtcgatatcgatagaactggagccaacactgccccttttgtggtggtg
ccagcatctgacatgatccaacatctcagcagtctccttcagtctacagaggggtccgat
gtgacctttgagatcggcagagagatctttgctgcacaccggtgcgtacttgcctgcagg
tcaacggtcttcaaggggcttcttggctccatgaatgagggcacaacagcaggtgtcgta
cgcatagatgacatggaggcacgagtattcaagctcctccttgggttcatttaccgtgac
tcggtgcctgagaaagaagcagaagacgatgatgtcatgtggcagcacttgcttgtggcg
gcagatagatatgatctcctgaggctgaggctgatctgtgaacaaaagttatgtacatac
attaacacgactacagcagcaacgattcttgcgctagctgagcggcaccatggccgaggg
ctcaaggatgcttgcttggacttccttaccagggctcatgccaatctgcaggaggtaacg
gtgcttggtggcctggaccacctagcaagcacctgccctttagtcctcaaagagctcatt
gtcaagcttgtgtcacctaataagaaggctaggattgatgtcaacacagcatttgtcacg
gtgccggcatctgatatgcaccagcatttcactcacctcctccagtctggtgaggacacc
gatgttgtatttgaggtcagcggagagaagctccatgcacaccgctgcattcttgcagcc
aggtcagcagttttcagggctgagctttttggccccatgaaggagggcaccaccactggt
gtcatacgcataaacgatatggaagccagagtgttcaagttgatgcttactttcatttac
agtgactcgatgccagacattaacgaagaggaagacatggaggaggacgaggagaaggat
gacgacgtggacgacatagaagtgacgtggcagcacttgcttgtggcggcagatagatat
gatctccagaggttgaggctgatgtgtgaaaacaagttgtgtgggtacatcaacacaacc
aaggtggcgagcatccttgagctagctgagcagcatcattgccgagggctgaaggaggca
tgcttggattttctgaacttccctcctaatcttcaacaagtcatggcggccggcggcctc
agccacctgagtagtagctgtccctctgtcctgatagatctcattgccaagcttgcatac
ctgaagccatctgacgaactctaa
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