Sorghum bicolor (sorghum): 8064914
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Entry
8064914 CDS
T01086
Name
(RefSeq) 3-ketoacyl-CoA synthase 20 isoform X1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00062
Fatty acid elongation
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
sbi04626
Plant-pathogen interaction
Module
sbi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
8064914
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8064914
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
8064914
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GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
DUF6232
Motif
Other DBs
NCBI-GeneID:
8064914
NCBI-ProteinID:
XP_002464620
UniProt:
C5X1L0
A0A921RZE3
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All DBs
Position
1:26479600..26484785
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AA seq
524 aa
AA seq
DB search
MGSREVLGAAAPTTTTTTTTQANKVAVMSRRVVIQLLVLLAVVVFLAPPLSSKMPGSSLL
KEMENLVGLSPAAVAVACWAAAAAAWAYAVSRPRPVYLVDLSGYVAGAAHEASRAKTIAH
FGRCGRFSDESMAFQKRMLERSGLGERTHFPASLISVPVDMCLRTAREESHAVIFGVVDD
LLRRAAVAPAEVGVLIFNSSLLSPTPSFTSLIVNRYGMRHDVVSHNLSGMGCSAGIIAID
LAKRLLQVHRDTYALVVSTENITLNAYMGNNRPMLVTNTLFRVGGAAILLSNRGADRRRA
KYQLIHTVRTHRGAHDQSFGCVTQEEDDVGCVGVSLSKELMVVAGEALRTNITTLGPLVL
PMSEQLRFLATVVLNRVFRANVRAYLPDFKLAFDHFCIHAGGRGVLDELERSLKLSAWHM
EPSRMTLCRFGNTSSSSLWYELAYCEAKGRIRKGDRVWQIAFGSGFKCNSAVWKALRTVD
GGEEGNPWTPEMDVLPIHVPKVSPIDETTYTFPDGATYKVSSLG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcagggaggtgttgggtgctgctgcgccaacgacgacgacgacgacgacgacg
caggcgaacaaggtggcagtgatgagccgccgcgtcgtcatccagctgctcgtcctcctt
gccgtcgtcgtctttctggccccgccgctgtcgtcgaagatgccgggcagcagcctcctg
aaggagatggagaatctggtgggtctgagccccgcggcggtggcggttgcgtgctgggcg
gcggcggcggcggcgtgggcgtacgcggtgtcccgcccgcggccggtgtacctggtggac
ctgtccgggtacgtggccggcgcggcgcacgaggcgtcccgcgccaagacgatcgcgcac
ttcgggcggtgcgggcggttcagcgacgagagcatggcgttccagaagcggatgctggag
cggtcggggctcggcgagcggacgcacttcccggcgtcgctcatcagcgtgcccgtcgac
atgtgcctccgcacggcgcgggaggagtcgcacgccgtcatcttcggcgtcgtcgacgac
ctcctccgcagggccgcggtggcgcccgccgaggtcggcgtgctcatcttcaactccagc
ctgctcagcccgacgccgtccttcacctcgctcatcgtcaaccgctacgggatgcgccac
gacgtcgtcagccacaacctcagcgggatggggtgcagcgcgggcatcatcgccatcgac
ctcgccaagcgactgctccaggtgcaccgggacacgtacgcgctggtggtgagcacggag
aacatcaccctcaacgcgtacatgggcaacaaccggccgatgctggtgaccaacacgctc
ttccgcgtgggcggcgccgccatcctgctctccaaccgcggcgccgaccgccgccgcgcc
aagtaccagctcatccacacggtgcgcacccaccggggcgcgcacgaccagagcttcggc
tgcgtgacgcaggaggaggacgacgtcggctgcgtcggcgtctccctctccaaggagctc
atggtggtcgccggcgaggccctgcgcaccaacatcaccacgctgggccccctcgtcctg
cccatgtccgagcagctccggttcctcgccaccgtcgtcctcaaccgcgtcttccgcgcc
aacgtccgcgcctacctcccggacttcaagctcgccttcgaccacttctgcatccacgcc
ggcggccgcggcgtgctggacgagctggagcgcagcctcaagctcagcgcatggcacatg
gagccctccaggatgacgctctgccgcttcggcaacacatccagcagctcgctgtggtac
gagctcgcatactgcgaggccaagggacggatcaggaagggggacagggtgtggcagatc
gcgttcgggtccggattcaagtgcaacagcgccgtctggaaggcgctccggacggtcgac
ggcggcgaggagggaaacccgtggacgccggagatggacgtgctcccgatccacgtcccc
aaggtgtcgccaatcgacgagaccacctacacgttccctgacggcgcaacctacaaggtc
tcatctcttggttaa
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