Sorghum bicolor (sorghum): 8065093
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Entry
8065093 CDS
T01086
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8065093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8065093
Spliceosome [BR:
sbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
8065093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Cu-oxidase_4
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
8065093
NCBI-ProteinID:
XP_002437474
UniProt:
C5Z8A8
LinkDB
All DBs
Position
10:57922221..57927628
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AA seq
549 aa
AA seq
DB search
MGADEQPSPTRKRDREEEGEDLSDGGAAEKRPRAEGASLLGLATYEDEDEDEAARGHANG
RRAVEPDEEEDDDEEDDVRRAPERRPRQAELRRDCPYLDTVNRQVLDFDFEKFCSISLSN
LNVYACLVCGKYFQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCLPDGYEINDPSLEDIR
HVLNPRFTKEQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQSLMRVTPLR
NFFLIPENYQHRKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASDKRFQIGVQS
DPVEFMSWLLNTLHAKLKSSKKKNRSIIHDCFQGELEVVKEVHRKHIMEKREDGDEPNGE
AGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDGETVT
EVVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPKP
KENHKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMVALSET
YMQIYEQHE
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagacgagcagccatccccgacgcggaaacgcgaccgcgaggaagaaggagag
gacctctccgatgggggcgccgccgagaagcggccgcgcgcagagggcgcgtccctgctg
gggctggccacctacgaggacgaggatgaagacgaagcggccaggggccacgcgaatggc
cggcgcgcggtggagcctgatgaggaggaggatgacgatgaggaggacgacgtgaggagg
gctccggagaggaggcccaggcaggcggagctgcgccgggactgcccgtacctcgacacc
gtgaacagacaggttcttgattttgattttgagaagttctgttcaatctccttgtcaaat
ttgaatgtgtatgcatgcttggtctgtggaaaatatttccaaggaagagggttgaaatct
catgcatatacacacagtcttgaagcaggccatcatgtgttcattaatcttcaaaccgaa
aaggcttactgtcttcctgatggatatgagatcaatgatccatcgttagaagatattcgg
catgttctcaatccaaggtttacaaaagagcaggttctaaatcttgacaaaaataagcag
tggtctagagcacttgatggctccaattatctacctggaatggtgggtcttaacaacatc
aaggaaactgattttgtgaatgtcacaatacagtcattaatgagagttacgcctctgaga
aatttctttctaatccctgaaaactatcagcatagaaaatcaccattggttcatcgtttt
ggggaattgacacgtaagatttggcatgctaggaacttcaagggacaggttagtccacat
gagtttctgcaagcagttatgaaggccagcgacaaacggtttcagattggtgtacagtca
gacccagtggaatttatgtcatggctcttgaacacactgcatgcgaaactaaaaagctca
aagaagaaaaacagaagcataatacatgattgttttcagggagaacttgaagttgttaag
gaggttcataggaagcatataatggaaaagagagaggatggcgatgagccgaatggtgag
gcaggttcagtggttggaactgcagatggaattgttactgaaacatctaaggtcccattc
ctgatgctcggtcttgacctgccacctccaccacttttcaaagatgccatggagaaaaat
atcattccacaggtaccgttatttaacatactaaagaagtttgatggtgagactgtgaca
gaggtcgtccgaccatccattgcccgaatgaggtaccgagtcactagactaccgaagtat
ctgatccttcatatgcgaaggtttaccaaaaataacttctttgtcgagaaaaatcctact
ctagttaattttcctgtgaagaacttggaattgaaggactacattccattacctaagccg
aaagagaatcataagctacgttcaaagtatgacctcatagcaaacattgtccatgatggc
aaaccaggcgaggggtgctacagagtatttgtacagcggaaatctgaagaggcctggtac
gagatgcaggatcttcatgttaccgagactcttcctcaaatggtagctctctcagaaacc
tacatgcaaatatatgagcaacacgaatga
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