Sorghum bicolor (sorghum): 8065105
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Entry
8065105 CDS
T01086
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8065105
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
8065105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
RINT1_TIP1
Cep3
Motif
Other DBs
NCBI-GeneID:
8065105
NCBI-ProteinID:
XP_021305398
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All DBs
Position
10:58159177..58166813
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AA seq
621 aa
AA seq
DB search
MGAEQGYDDMEVTLRDSDVFNYIVEVLQNVRMDPFLIDLRYKSQYDFLLDLVDPTKKRTS
DEEAMFATTLEALSEAVSTIDTMYHHALLHNIFTMCVWYLNSYTRVVLLDLITRLAAVAD
QYLRECLQMLVNNFTPPGPLIRYIEEPRWLAKKEEIYSQLQESLKKISDTVPLAPRMLKD
IIDRSMPKLFDSKAKMVSFVECMLGLDADTWDIIGPSLLEKVVYLLTELDVNITWEDILQ
DEHNKGIFDMELEDLDEDEDNLGQEGTKVLFGGNVCAEKLDGLMVVVCKHLKSRAEEPDR
LNKEFDTLKAIFKSHVIRVHKSKFAQFIMFYACSLYPKICGEGFAFFLVDIFIDKDKKED
AITRMSAVSYVGSYLSRARFISVNTVVAVLQRLVEWCGDYCGSQLDKGVTANPIKHQLFY
ASCQAVMYVLCFRLRSIMDYPNLKLQLFQMRIQNILAHPLEPLKVCLPSIVNEFLRQARS
ASLFHASVNSTHEDAVESDLSKAFGGLNRLDMFFPFDPYLLKESDRYIRPNFEFWSLVKT
TYSNNNSDEDNDELADIDAPGMNVGSLDDHFEIDFNNDDDIEYSMNKMSITPHRTFYHPL
ATNSEFSSMPARIRPSVSPPS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggagcagggctacgacgacatggaggtgaccctcagagactctgacgtgttc
aattatatcgtggaggtgctgcagaacgtccggatggatccatttttaatcgacctaagg
tacaaaagtcaatatgatttcctgctagaccttgtagaccctaccaagaaaaggactagt
gatgaggaggctatgtttgctactactttggaggcactatcagaagcagtatccacgata
gacaccatgtatcaccatgcacttctacacaatatatttaccatgtgcgtctggtactta
aacagctacacaagggttgtgcttttggacttaataaccagattggctgctgtggcagac
cagtacctcagagaatgtttgcagatgcttgtgaataatttcactccacctggaccactt
attcgttacattgaagagccaaggtggcttgcaaagaaggaagaaatatactctcagttg
caagagagtttgaaaaagatttctgacactgtgcccttagcaccaaggatgttaaaggat
ataatagataggagtatgccaaagttgtttgatagcaaagctaagatggtatcatttgtc
gaatgcatgttgggccttgatgctgacacttgggacatcattggaccttcattgttggag
aaagttgtttatctacttacggaattggatgttaatataacatgggaagatattcttcaa
gatgaacacaacaaaggtatatttgacatggaacttgaggatttggatgaggatgaagat
aaccttggtcaagaaggaacaaaggtcctgtttggaggaaatgtgtgtgccgaaaaactt
gatggtttaatggtggttgtgtgcaagcacctcaagtcacgcgcagaagaacctgatcgc
ctaaataaggaatttgacactttgaaggctatattcaaatcacatgtgattagggtgcac
aaatccaaatttgcacagtttatcatgttttatgcttgttccctgtatccaaagatttgt
ggtgagggctttgctttttttcttgtcgatatttttattgacaaggacaaaaaggaggat
gcaataactagaatgtctgcagtttcatatgttggaagctatctgtcccgggcaaggttc
atttccgtaaatacagttgttgctgtactccaaaggttagtggagtggtgcggggactat
tgtggcagtcagctggacaaaggggtgacagccaatcctataaaacatcaactattttat
gccagctgccaggctgtgatgtatgtcctatgctttcggttaagatctattatggactac
ccaaatcttaaactacaactttttcaaatgcgaatccagaatatcttggcccatccattg
gagccattaaaggtgtgcttgccttcaatagtgaatgagttcttgagacaggctaggtct
gcgagtctgttccatgcatctgtgaattcaacacatgaagatgcagttgaatctgatcta
tcgaaggcatttggaggacttaataggcttgacatgttcttcccatttgacccatatctg
cttaaagagtctgacaggtatatacgcccaaattttgagttctggtccttggtcaagacg
acatacagtaacaacaacagcgacgaggacaatgacgagcttgcagacattgacgcaccc
ggaatgaatgtgggcagcttggatgatcactttgaaatagatttcaacaatgatgatgac
attgagtattcgatgaataagatgtccataacgccgcaccgcactttctaccatccactg
gctacaaacagtgagttcagcagcatgcctgcgaggatcagaccttcagtgagccctcca
tcatag
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