Sorghum bicolor (sorghum): 8065326
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Entry
8065326 CDS
T01086
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8065326
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
8065326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EZ
HEAT_EF3_N
TOR1L1_N
HEAT_2
HEAT_ECM29
TPR_Trm732_C
Vac14_Fab1_bd
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
8065326
NCBI-ProteinID:
XP_021302871
LinkDB
All DBs
Position
9:complement(59004280..59018588)
Genome browser
AA seq
2048 aa
AA seq
DB search
MAQNSSRLHRLLTLLDTGSTQATRFAAARQIGEIAKSHPQELNSLLKKVSQYTRSKNWDT
RVAAAHAIGAIAENVKHTSLKDLYASVQAEKHASGFSDGSDDAGSALPQTDSATTSDLAF
GSFDIGRVLEFGSPLLASGGQEYDIADNGKNPAERLARQKQNLRRRLGLDVCEQFMDVSD
VIKDEDLLAQKNYWGSHVQNNGFHSFNSGRNIQQLVSTMVPRYPKHSNFRSRRLSARELN
MLKRKAKSNAKDHTKAVSEDDEVTLKGYVPSNGASSEQAGPQNDVFDTAVDEDNLEYSEN
GRWPFQQFVDQLIHDMFDPIWEVRHGTIMALREILTHHGGCAGVYFPDLSLPSADLDGKT
NFDSLKREHGIDLNEDVRVERLEPALKRHKKEPNCSESIYRANDKEFANSDYPKAEGDPS
NVPDVLTGEPSSTHVKVEPEFGVEASTDPSKVDSTCKSLQEELNSISHPSSHIHAPENPK
FMKLMKLAKYSYMKNWEFLQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAVLK
YMHPSLVCHTFKILLQMQRRQEWEVRHGSLLGIKYLVAVRQEMLKDLLDYIIHACKAGLE
DPDDDVRAVAAEALIPAADSLVRLNDQILRPIVMLLWDILLDLDDLSPSTSSVMNLLAEI
YSRPEMVPKMLGTAASGEKGEFDLNEATQIAEQEDRLTSIENPYGLATLTPRLWPFMRHS
ITSVRRSAIRTLEKLLEVGNTRSSVGTTPSKLWPTSILGDALQVVFQNLLLESNDDILHS
SERAWKLLLQCPEKDLEYAARLYFSNWVQLATTPFGSALDSTRMFSPVALPRGNRSRAAA
KIRSARLDHEYTRMISFGCTGESTSHEKHLDVPSSVSKIIVGADPDKSVTHTRVLTSMAL
GLFASKLPVSSWQVVLSPLANDLMSLSGVQRQVASMIIVSWFKDLRGRDPVSVGTLLTSL
SSLKEWLLDLLTCSDPALPTKDSVLPYSELSRTYTKMRNEANNLLNSIDSCAAFKDYISS
LNLNVDVLSVDDAINFASKLLLPSESDLPSESEKIFLNNIESAKQGLLSTSGYLKCVQNN
LHVTVSSLVASAVVWMSCLPSKLNPVILPLMAAIKREQEEVLQDKAADALAELIFSCVGR
KPGPNDKLTKNLCTLTCTDASETPQAAIINSMQVIEDQNLLSIGKRFSSHRSRGHTTSGG
DERSKMEGFISRRGSELAFKHLCEKFGPSLFEKLPKLWDCLTEFLKPVKTEDGIPKNDAS
IAQLGRSYEDKDPQSLINNIQVIRSISPHLAEPLRPQLLNLLPCILGCVRHPHVAVRLAA
ARCITSMAKSLTDDVMVLVIENVIPMLSDLSSVCARQGAGILLSLLVQGLAVELVPYAPF
LVVPLLKCMSDPDGSVRQTVTHSFAALVPLLPLSRGASLPGGLSERLSSSAEDVQFLEQL
LDNTQIDDFKLNIDLSVELRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVAS
DIAEARARNDDKNLTSLIICPSTLVAHWEYEIEKYIDTSILKPLQYVGSSQDRVTLRSEF
DKVNVIITSYDIIRKDIDFLGSIPWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSG
TPIQNNVLELWSLFDFLMPGFLGTEKQFQATYGKPLLAAKDSKCSAKDAEAGILAMEALH
KQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPLQLKLYDKFSSSNAKEEISTIVKANES
EESAPQPKATRHVFQALQYLLKLCGHPLLATGESPPNHLVDLLKEIGVGSGSELHELHHS
PKLVALQEILHECGIGSEVSSPDASTAVGQHRVLIFAQHKAFLDIIEKDLFQSHMRSVTY
LRLDGSVDPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMKDL
QAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENSSLKTMNTDQL
LDLFTSTPASRKASVLPRGSSDEQSKDSKRKSGGKGLKSILNGLDELWDQSQYADEYDLN
QFLAKLNG
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaactcgtcccgtcttcaccgcctcctcacattactagacactggttcgaca
caagcaacgaggtttgcggctgcacgccaaattggagaaatcgccaagtcccatccacag
gagctgaattcgttgctcaaaaaggtttctcaatatactcgtagtaaaaactgggacaca
agggttgcggcagcccatgcgattggtgcgatagcagagaatgtcaaacacacatcattg
aaggacttgtatgcttctgtgcaagcagaaaaacatgcttccgggttctctgatggaagt
gatgatgctggttcagcattgccacagactgatagtgcaacaacatctgatcttgctttt
ggaagctttgacataggcagggtattggaatttggatctcctctattggcatcaggtgga
caggaatacgacattgctgataatggcaagaatccagcagagcgtctagctcgccaaaag
caaaatcttcggcgtcgtttaggactggatgtatgtgagcaatttatggatgttagtgat
gttatcaaagacgaggatcttcttgcccaaaaaaattattggggttcacatgtacagaat
aacggatttcattcatttaattcaggccgtaatattcagcagttggtttccaccatggtt
cctaggtatcccaagcattctaattttcgctctagacgattaagtgccagggagctaaat
atgttgaagcgtaaagcaaagagtaatgcaaaagatcatacaaaggctgtatctgaggat
gatgaggttacactaaaaggatatgtgccctccaatggagcttcttctgaacaagctggt
ccacaaaatgatgtatttgatacagctgtcgacgaagacaatctagagtacagtgagaat
ggaagatggccttttcagcaatttgtggatcagcttattcatgatatgtttgaccctatt
tgggaagttcgccatggcaccattatggctttaagggaaattttgacacatcatggtggt
tgtgctggagtatattttcctgatctgagcttgccttctgctgatttggatggtaaaacc
aactttgactcccttaaaagggaacatggtattgatctaaacgaagatgttcgtgtggaa
cgccttgaaccagcgttaaagaggcataagaaagagccaaattgttctgaaagtatatat
agggctaatgataaggagtttgctaacagtgattatccaaaagcggaaggagatccgagc
aatgtgcctgatgtattaactggtgaaccaagttctactcatgtaaaagttgagcctgag
tttggtgttgaggcttcaactgacccctctaaagtggattcaacatgtaaatcattacag
gaagaactcaactccatatcacatccaagttctcatatacatgctccagaaaatccaaaa
ttcatgaaactgatgaaattagctaaatactcatatatgaagaattgggaatttcttcag
gattgtgcaatccgcttcctttgtgtactttcactggaccgctttggtgattatgtatcc
gatcaagttgttgccccagttcgtgaaacttgtgctcaagctcttggtgctgtgctgaag
tacatgcacccttctttagtatgtcatacattcaaaatcttgctgcagatgcagcgcaga
caagagtgggaggttcgtcatgggagccttcttggcattaaatacttagttgctgttcgc
caggaaatgcttaaagatttgcttgactatatcattcatgcttgtaaagctggtctggag
gaccctgatgatgatgttcgagcagtggctgcagaagccctgattccagctgccgactcg
ttagttaggctaaatgaccaaattttgcgtccaattgtgatgttactttgggatatattg
cttgaccttgatgatttaagcccatctacaagcagtgtaatgaacttgttagcagaaata
tattctcgaccagagatggtcccaaagatgcttggtacagcagcttcaggggaaaaggga
gaatttgatctaaacgaagcaactcagattgctgagcaagaagaccgactaacatctatt
gagaacccttatggtctagctacactgaccccccggctgtggccctttatgagacatagt
attacttctgttcggcgttccgcgatacgaacactggagaagcttcttgaggttggcaac
actaggagttcagttggaacaaccccatctaaactctggccaacatcaatattaggtgat
gcactgcaggttgtatttcagaacctacttttggagtcaaatgatgatattcttcattct
tctgaaagggcttggaaacttctacttcagtgccctgagaaggaccttgaatacgctgcg
aggttgtattttagtaattgggtacaacttgctactactccatttggctcagcattggat
tctacaagaatgttttcacctgttgcccttccacgaggaaatcgttcgagagctgctgca
aagattagatctgctaggctagatcatgagtacacaagaatgatctcgtttggttgtaca
ggggaaagtacttcacatgaaaagcatttggatgttccctctagcgtttccaagataatt
gttggtgctgatccggataaatctgttactcatacacgagttcttacgtcaatggcgctt
gggctttttgcctctaagttgcccgtaagctcatggcaagttgttctaagtccactagca
aatgacctcatgtctctctcaggagtccagagacaggtggcttcaatgatcatcgtttct
tggttcaaagatctcagaggcagagatcctgtatcagtgggtacattgctaacttcccta
tcttccttgaaagagtggctgctggacttattgacttgctctgatccagcattacccaca
aaagattctgtgcttccatattctgaactttcaaggacatacacgaagatgcgcaatgaa
gccaataatttgctcaactcaatcgattcatgtgctgctttcaaagattatattagcagc
ttaaaccttaatgttgatgtgctgagtgttgatgatgctatcaactttgcatcaaagctt
ttgttaccatctgaatcggatcttccttcagaaagtgaaaagattttcctgaataacata
gaatctgcaaaacaaggcctgttgtctacatcaggctacttgaaatgtgttcagaataat
ttgcatgtgacagtctcttctttggtggcttctgctgtagtttggatgtcatgtttgcct
agcaagttgaaccctgttattttacctttaatggctgccattaaaagagaacaggaggaa
gtacttcaagataaagctgctgatgcacttgctgagctcatatttagctgtgttggccgc
aagcctggccccaatgacaagctaaccaagaatctctgcactctgacatgtactgatgct
agtgagacacctcaagctgcaataatcaactcaatgcaggttattgaggaccagaatttg
ctatcgattggaaagcgttttagcagtcatagatccaggggtcatacaacgtctggtggc
gacgaaaggtcaaaaatggagggttttataagccgacgtggatcagagttagctttcaag
catctctgtgagaaatttggaccttcattgtttgaaaaacttcccaagttatgggattgc
cttactgagtttcttaaacctgtaaaaactgaagatggtattccaaaaaatgatgcaagt
attgcacagctgggcagatcatatgaggataaggacccacagtcactcattaataacatc
caggtcattcgttccatttcacctcacttggctgagcccttaaggcctcaattgctaaat
ctccttccctgtattcttgggtgtgttcgtcatcctcatgtggctgttagactagctgct
gcaaggtgcatcacatctatggcgaagtcattgaccgatgatgtgatggtactggtgata
gaaaatgtcatcccaatgttgtccgatttatcttctgtctgtgcaagacaaggagctggg
attcttttgagccttcttgttcagggtttggctgtggagttggttccttatgcacctttc
cttgttgttcctcttctgaagtgtatgagtgacccagatggttctgttaggcagactgtg
actcacagttttgctgctcttgttcctttgctgccattatcaaggggtgcttcattacca
ggtggactaagtgaacgcttatctagcagtgctgaagatgtgcagtttctggaacagctc
cttgacaacacccaaattgatgatttcaagcttaatattgatcttagcgttgagttacga
aggtatcagcaggaagggatcaactggctcgcattccttcgtcggtttaaattacatgga
attttatgtgatgacatggggctcggtaagacgctccaagcatctgctattgtagcaagt
gacattgcagaagcacgtgcacggaatgatgacaaaaatctcacatctttgattatctgc
ccttctacattagtggcccactgggaatatgaaatagagaagtacatagacacctctatc
ttgaaacctcttcagtacgttggttcttcgcaggacagagtgacactccgtagtgagttt
gataaggttaacgttatcataacatcatatgatattatacgcaaggatattgattttctt
gggagtatcccttggaactattgtgttctggacgaagggcatataataaaaaactcaagg
tctaaaataacgtctgctgtgaaacagttgaaagcacaacaccgccttatcttgagtggc
acacctattcagaataatgtgttggagttatggtctttatttgacttccttatgcctggg
tttcttgggacagaaaaacaattccaagctacatatggaaaaccattgctagctgccaaa
gattctaaatgttcagcaaaggatgctgaagctggtattcttgcaatggaggcactgcat
aagcaggtcatgccatttctactgagaagaacaaaggatgaagttttatctgatcttcca
gagaagattatccaggatagatattgcgatctgagtccattgcagctcaaactttacgac
aaattttccagctccaatgcaaaagaagagatttcaactatagtaaaagcaaatgaatcg
gaggaatccgcacctcaaccaaaggcaactcgtcatgtgtttcaggcactgcagtaccta
ttaaaactctgtggccatcctttgctcgcaactggagagagcccccctaatcatcttgtg
gatcttctgaaagaaataggcgtgggatctggcagtgagcttcatgaacttcaccactca
cctaagcttgttgctcttcaagaaatactacacgaatgtggtatagggtcagaagtatct
agtcctgatgcttcgacagctgttgggcaacacagagttttgatttttgctcagcataag
gcttttctcgacatcatagagaaggacctgtttcaatctcatatgagaagtgtcacatat
ttgcggctggatggctctgttgatccagagaagagatttgaaattgttaaagcattcaat
tcagacccaaccattgatgtacttctgctaacaacccatgttggtgggcttggcttgaac
ttgacatctgccgacacattggtgttcatggaacatgattggaacccaatgaaggatctt
caagctatggacagggcacatcggttgggtcagaggaaagtggtgaatgttcaccgtctt
atcatgcgtggcacccttgaggagaaggtgatgtctctccagaggttcaaggtgtcagtc
gccaatgctgtcatcaacgctgagaactccagcttgaagaccatgaacactgaccagctg
cttgatctgttcacatctacccctgcttcaagaaaagcatcggtccttccacgtggttca
agcgacgagcagagtaaagattccaagaggaaatctggtggcaaaggcttgaagtcaatt
ctgaatgggctggatgagctttgggatcagtcgcagtatgctgatgagtacgatctgaac
cagttcctggcgaagctgaacggctga
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integrated database retrieval system
