KEGG   Sorghum bicolor (sorghum): 8065344
Entry
8065344           CDS       T01086                                 
Name
(RefSeq) putative RING-H2 finger protein ATL12
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
sbi  Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8065344
Enzymes [BR:sbi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     8065344
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    8065344
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-RING_11 zf-ANAPC11 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_16 zf-RING_4 Prok-RING_1 Prok-RING_4 FANCL_C zf-C3HC4_5 RINGv zf-Vps39_C
Other DBs
NCBI-GeneID: 8065344
NCBI-ProteinID: XP_002440385
UniProt: C5YX35
LinkDB
Position
9:59310738..59312571
AA seq 473 aa
MALPVPGQQLALLAVLFSAAAVAAAQPTTDELSASPAADNNSAPAGVGIKVSFRPRVAIV
VGIFTMIFSLTFILLMYAKFCHPSSSPSPAASALVGGGETGGNNGAAAAAAAVGVPKQVI
ESLPFFRFATLRGARQGMECSVCLARFDDADLLRLLPRCHHAFHLDCVDRWLQSSASCPL
CRTSVDADDATLGLKYPSSARIVFGGDALSSGRFDDAAAAAAAGTAGSGRDLLDIFVERV
PGPDTKPQQQQQQQVGDVDDEEEAISSSVALPPGQELDRHKHRIIVSDVVFKSRWSELNS
ADLIALDMEMLRSMSSSSGRFVFPPDSPYCPEYSNEAQQAPNNKEIAAEEEEEEDEDGVV
PTTSRKRLLKPVVVVDARLGGGCSSGSAVSASAARMISSGVRSMSEIVSLPRLRAAARER
LSEEENRNRRWLPIARRTARWFAGRASRGQQQEEEEEEEHRAVHVVAAEHDDV
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggcgctgccggtgccgggccagcagctcgctctcctcgcggtcctcttctctgcggcc
gccgtggccgcagcgcagccgaccaccgacgagctgtctgcatctccggcggcggataac
aacagcgcaccggcgggcgtgggcatcaaggtgtccttccgcccccgagtggccatcgtg
gtgggcatcttcaccatgatcttctccctcaccttcatcctcctcatgtacgccaagttc
tgccacccctcctcgtctccctcgcccgctgcctcggcgctggtgggaggcggagagaca
ggcggtaacaatggcgccgccgccgcagcagcagcagtcggagtccccaagcaggtgatc
gagtcgctgcccttcttccggttcgccaccctgcgcggggcgcgtcaggggatggagtgc
tccgtctgcctcgcccgcttcgacgacgccgatctcctccgcctcctgccgcgctgccac
cacgccttccacctcgactgcgtcgaccgctggctccagtccagcgccagctgcccgctg
tgccggaccagcgtcgacgccgacgacgccacactcgggctcaagtacccatccagcgcg
cgcatcgtcttcggtggcgacgcgctgtcctctggccgcttcgacgacgctgctgctgct
gctgctgctgggacagcagggagcggacgcgacctcctcgacatcttcgtggagcgcgtg
cccgggccggacacgaagcctcagcagcagcagcagcagcaggttggtgatgttgatgat
gaggaggaggcgatatcatcatcggtggcgctgccgccggggcaggagctggacaggcac
aagcaccgcatcatcgtgtccgacgtggtgttcaagagccggtggagcgagctcaactcc
gccgacctcatcgcgctcgacatggagatgctgcgctccatgtccagctccagcggccgc
ttcgtgttcccgccggattccccttattgcccggagtacagcaacgaggcccagcaggcc
cccaacaacaaagagatagcagcagaagaagaagaagaagaagacgaggacggtgtcgtg
ccgacgacgtcgaggaagcggctgctgaagcctgtcgtcgtggtggacgcccggctagga
ggcgggtgcagcagcggctccgccgtgtcagcgtccgcggcgaggatgatatcctccggg
gtgcgctccatgtcggagatcgtgagcctgccacggctgcgcgccgcggcgagggagcgg
ctgtcggaggaggagaatcgcaatcggcggtggctgccgatcgcacggcggacggcgcgg
tggttcgctgggcgcgccagcagggggcagcagcaggaggaggaggaggaggaggagcac
cgagctgtccacgtcgtggcggcggagcatgatgatgtgtga

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