Sorghum bicolor (sorghum): 8065353
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Entry
8065353 CDS
T01086
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8065353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8065353
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8065353
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
U-box type E3
8065353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
PUB10_N
ARM_PUB
ARM_ARMC5
HEAT_2
zf-RING_UBOX
HEAT_EZ
ARMC9_ARM
zf-C3HC4_4
Arm_2
zf-Nse
zf-C3HC4_2
WRM1_C
zf-C3HC4
V-ATPase_H_N
KAP
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
8065353
NCBI-ProteinID:
XP_002436313
UniProt:
C5Z221
LinkDB
All DBs
Position
10:83986..86639
Genome browser
AA seq
601 aa
AA seq
DB search
MPARVAAEIAALPEPRGPMRRLCGDLTRRIRLLAPLFQHLQDRGDALLLADALGAARDLL
RAVHDGSKIYQAMQGDAVLQRFATVNRHIHLALDALPYQTFDMPEEVLEQVDLVHSQFKR
AATTVAPPDAQLSKDICSALADKAFDPRVLTRISDKLQLHTMADIKKESLALHEMVISSG
GEPDGCVEEMSSLLKKLKDCVVTEAPTTETLSTRSASIKHTSPIIPDEFRCPISLELMQD
PVIVSSGQTYERSCIQKWLDSGHKTCPKTQQLLSHTSLTPNFVLKSLIAQWCEANGIELP
KNKANSRDKKAAKSSDYDHAGLVSLMNRLRSGSQDEQRAAAGEIRLLAKRNVNNRICIAE
AGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKANIVSSHAIPKIVEVLKTGSMEAR
ENAAATLFSLSVVDENKVTIGGAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKIR
AVKAGIVIHLMNFLVDPTGGMIDEALTLLAILAGNPEAKAVIAQSDPIPPLVEVIKTGSP
RNRENAAAVLWSLCCTAVEQTRAAKAAGAEDALKELSDSGTERAKRKASSILELMRQAEE
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcgtgtggcggcggagatcgccgcgctcccggagccgcgcgggcccatgcgc
cgcctctgtggtgacctcacgcgccgcatccgcctcctggcgcccctcttccagcacctc
caagaccggggcgacgccttgcttctcgcagacgcgctgggcgccgcgcgcgatctcctc
cgcgcagttcacgatggcagcaagatctaccaggccatgcaaggggatgccgtgctccaa
cgctttgcaactgtcaacaggcacattcacctagccttggatgccttgccctaccaaacc
ttcgacatgcctgaagaagtgctggagcaggtcgatcttgtgcattctcaattcaaaagg
gctgcaaccacagttgctccaccagatgcacagctgtccaaggatatatgctctgctctt
gctgacaaggcctttgaccctcgggtcttgacgaggatctcagataagctgcaattgcac
accatggccgatatcaagaaagagtccctcgccctgcatgagatggtcatctccagtggc
ggcgaacctgatggctgcgttgaggagatgtcctccttgctcaagaagcttaaagactgt
gtcgtcactgaagctcccaccacagagacgctcagcaccaggtctgcctccataaagcat
acatctcctatcatccctgatgaattcagatgcccaatatcccttgagctcatgcaagac
cctgtcatcgtttccagcggacagacttatgagcgatcttgcatccagaaatggcttgat
tctggacacaagacatgccctaagacacagcagctcctctcccatacgtcactgacacca
aactttgtcctgaaaagcctaatagctcagtggtgtgaagccaacggcattgagcttccg
aagaacaaggcaaactcccgagacaagaaagcagcaaaaagctctgactacgaccatgct
ggtttagtctccctaatgaacaggctgaggagtggcagccaagatgagcaacgtgcagct
gctggtgagatccgtttgcttgcaaagagaaatgtcaacaaccggatatgcattgctgaa
gcaggagcaattcccttgctagtcaatctactttcctcttcagatccaagaacgcaggaa
catgctgtcacagcgctccttaatctctctatccatgagaacaacaaggcaaacattgta
agctctcatgctatccctaagattgtggaagtgctcaaaactgggagcatggaagctaga
gagaatgcagcagccacattatttagcttgtccgttgtagatgaaaacaaggttacaatt
ggtggcgctggcgcaatacctccactcattaatcttctgtgcgatgggagcccaagaggg
aagaaagatgctgcaacggcaatttttaatctgtgcatataccagggaaataagatacga
gcagtgaaagctggaatcgttatccatctgatgaacttcttggtggaccctactggggga
atgattgatgaggcactcactcttctggctattcttgctggtaaccctgaagccaaggct
gtaattgcgcaatcggatcccatcccgccacttgtggaggtgattaaaactgggtctcct
cgcaatagagagaatgctgcagccgttctgtggtcactttgttgcactgctgttgagcaa
acgagggctgcaaaggctgctggagcagaggatgcactcaaggaactgtcagattctggc
acagagcgtgcaaagagaaaagcttctagcattctggaactcatgcgtcaagctgaagaa
gcatga
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