Sorghum bicolor (sorghum): 8065361
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Entry
8065361 CDS
T01086
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8065361
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
8065361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
8065361
NCBI-ProteinID:
XP_021305153
LinkDB
All DBs
Position
10:complement(175152..190529)
Genome browser
AA seq
1912 aa
AA seq
DB search
MWTNIFKIGELQTVSWFQFLPFEPDASAASEKSSKAEQKDALNSIVLSAYLHLQSEGFLS
TWTNSFVGPWDPSQGEHNPDEKIKLWLFLPGCHSSVSEKAQPAVNKLRVASNGLWVAPGN
SEEVAAALSQALRNSLERSLKGLSYARFGDVFTKYNPPTRNQNSFRRAQPTVEFVFAATE
EAIFVHVLISARYVRNLCSDDIEKVLTHSPPSIGEGLPVVVAPSGMLGRLVGCCPSDLVR
QVYSSKSSAPNLPGFSQPTVCQLRGQSYYVEVALGFPAASADKVSESEHIQIKKELDPVK
DAQVGADGQRKVESPDSLPVFERTFIYPPEAILVPMVHQAFVRFSSKRMCLQGSLGSSSW
EGWPFWNFSPSSYFQNSSFLGSSCGLGVNSNYLRLRRKKNKCNSMASSISSVSSTSDGSD
RAVATEGDLVADADSMPGRQSDMPSNNDNGGSKMVSKRPRSEVREVSSHTGQDVCENIQG
VNGQVGRSWGWDDEGIVMDINILLSEFGDFSDFFQEEELDFGEPPGTAESHALVIPASDG
GDVTFTDSPSTAMDIPEQRLSPVGFTSLDAFDHQIMVPAQDVVSKVQEPHKDSATPAQSH
SLVLSSGRFDYITKAEAKLTFAPEYAAVEISIAEAPTPLFTNPYFPRSKKPGSSSFRVYS
YDIAQSSQIESTGDKPDKPSKLTSGIHLHDVGSSNLYTLVQGGKKESDKSLKSTDIQPSK
GETSPPISGVTSFSSSLVSQKKSDSTFNAGYFLLSMKTALATEIECIMFQAAMCRIRHTL
LSLRSKASAEFNSATSSFMQTNFCNKSDLTPKYDMRKKEIMTVRLSSDVDHEMFDRSLMD
NVGVWRPVVTPKGPKSLESLSANTLAGASPSLSIQRQPVVDLLCAMALLVQQSTSFVDMS
LDMDDGDGSFFWLSLDEQKRRGFSCDPSMVHAGCGGLLGTCHSKDCAGVDLVDPLSAEVS
ESSMISLLQSDIRQALKAAFANMDGPLSVIDWCRGRGNAAESVTADAYSFQYSTGDTLEP
SSSLPIGGDSLSPPQPASSNRGISELEYQKGYHRIRPTIAVLPSPSMLVGYQDDWLKASV
NSLKTWEKAPFEPYALPKPVTYYALCPDIDMLTSAAADFFMQLGTVYEVCKLGTHSPQNS
GGQMELSSGKYLPSGLVLVECPEQLKKVGCGHLSPITSTSDYLQVFSKHWSVKSFVTSIS
RILKDIKLTSNISTNQKESSSGPCTVIYVVCPFPEPCAILQTLVECSVALGYVISSPERE
RKSLYSQVAKALNSSASADEASASNVVMLSGFSIPKLVLQIVTIETVLRIDKPNKELAVL
KDIAFTVYNKARRIPRAVSTSDMFQSPTYLGRSQSTMMHVTSPAPTLWKECLVPRMSGPT
LSRETDFDASMRSATWDNSWQPARSGGLLDPSKMPDLCAQDDRKYAFEPLFILADPGSAD
LNALMEPSKSGADAGGSRVYGSMSGSNSDSGVSPLLDVSESDSAASLHCCYGWTEDWRWL
VCIWTDARGELLDSLIFPFGGISSRQDTKVLQSLFIQILQQGCQIMSSSPEASNMRPRDV
IITRIGGFLELEIQEWQKAIYSFGGNEVKKWPVQLRRSIPEGIPPSSNGPTLQQQDMALI
QDRNMPSSPNPLYSPHSKSSFMKGALGQSGNKKQILVEQTGMDTSRGPLHLVRSISLVAV
SQDHSLHLTCQTDLLTRPASGEGNQGSSGLSSYLEGFTPVKSIGSMPASHSYLLVPSPSM
RYLSPATLQLPTCLTSESPPLAHLLHSKGTAIPLAMGYVVSKAVPPVRRDSAQLTKDEQP
SVLLVSIIDHYGGSIATVQEKMSRGGGGSNMSKQARNFTQETTTRDCEVEMHNVLEAVAT
ELHSLSWLTVSPVYTERRTALPFHCDMVLRMRRLLHYADKYLSQPAEKGETT
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaacattttcaaaataggggagctccaaacggtttcgtggtttcagtttctt
cctttcgaaccagatgcaagtgcagcgtctgagaagagttcaaaggctgagcagaaagac
gctcttaatagcattgtgctttcagcatatcttcacttacaaagtgaaggtttcctaagt
acttggactaattcctttgttggtccatgggatccatctcaaggagagcataaccctgat
gaaaagatcaagctctggttgtttcttcctggctgccactcatcggtatctgaaaaagcc
caacctgctgtaaacaaattaagagttgcttcaaatggtttatgggtagccccaggcaac
tcagaagaggtagcagctgcactgtctcaggctttaagaaattctttagaaagatcacta
aaagggctttcgtatgcaaggtttggtgatgtttttacaaaatacaacccccctacaaga
aaccaaaacagctttaggagagcacagcctacagttgagtttgtctttgctgccaccgaa
gaagcaatatttgttcatgttctgatatctgctaggtatgttcggaacctttgtagcgat
gacatagagaaagttctcactcattctcctccctccattggtgaaggtcttccagttgtt
gttgctcctagtgggatgctgggtaggcttgtcggttgctgtccaagtgatcttgtaaga
caagtatattcaagcaaatcatcagcacctaatttaccaggttttagtcaacctactgta
tgccagctaagaggccaaagttactatgttgaagttgcacttggctttccagctgcttca
gccgacaaagtttctgagtccgagcatattcagataaaaaaagaattggatccagtgaag
gatgctcaggttggtgctgatggacagcgtaaggtagaatcacctgatagccttccagtt
tttgagaggacatttatttacccacctgaggctattttggtacctatggtccatcaagca
tttgttcgtttttcgagcaaaagaatgtgtttacagggctcgctgggaagttcatcatgg
gagggatggccgttctggaatttttctccatcttcttactttcagaacagctctttcctt
ggatcttcttgtggacttggagtcaattctaattatctgagattaagaaggaaaaaaaac
aagtgcaacagcatggccagcagtattagcagtgtgagtagcacttctgatggaagtgac
cgtgcagttgctactgaaggtgatcttgtagctgacgctgactctatgcccggtcgtcag
tctgatatgccatccaacaatgataatggcggtagtaagatggtatccaagcggcctcgt
tctgaagtaagagaagtttcttctcatactggccaagatgtttgtgaaaacatacaaggt
gtgaatggtcaggttggacgctcttggggctgggatgatgagggtattgttatggacatc
aatatacttctctcagagttcggagattttagtgacttttttcaagaagaggagttagat
tttggtgagcctccaggtactgctgaatcacatgctctagtaattcctgcttccgacggt
ggagatgtcacattcacagatagtccatcaacagcaatggatatccctgaacaaagactt
tctcctgttggtttcacatctttggatgcatttgaccaccaaattatggtccctgctcag
gatgttgtttctaaagttcaagaacctcataaagattccgcaacacctgcacagtcccac
tcgttagttttatcatctggaagatttgattatatcaccaaagctgaagcaaagctcaca
tttgctccagaatatgcagctgttgaaatttctattgcggaggccccaacaccattgttt
acaaatccatacttccccagatcaaagaaacctggcagttctagttttagagtttattca
tacgatattgcacaaagctctcaaattgagtccacaggagacaagccagataagccttct
aaactaacatctggtattcatttacatgatgttggttcatcaaacttatacacacttgtc
caaggtgggaagaaagagagtgacaagagcttaaagagtactgatatacagccctctaag
ggagaaacgtcaccacctatttctggtgtgacttcatttagttcttctcttgtttcgcaa
aagaagagtgacagcacgttcaatgccggctattttctgctttctatgaagactgctctg
gcaactgaaattgaatgcatcatgttccaggctgccatgtgcagaattaggcatacacta
ttgtctctgagaagcaaagcgtctgccgagtttaacagtgcaacatccagttttatgcag
acaaatttctgcaacaaatcagatctcacccccaagtatgacatgagaaaaaaagaaatt
atgactgtaaggttatctagtgatgttgatcatgaaatgtttgacagatccttaatggac
aatgtgggagtttggaggcctgttgttacgcctaaagggccaaagtctcttgagtctttg
tctgctaacacattagctggtgcaagcccaagcctgtctatacaaagacagcctgttgta
gatctcctctgtgccatggctctgcttgttcaacaatctacttcatttgttgatatgtca
cttgatatggatgatggagatggttcttttttctggctttccctggatgagcaaaagaga
cgtggattttcttgtgatccttctatggttcatgctggctgtggtggcctattaggaaca
tgccattcaaaggattgcgctggtgttgatttagttgatccactttctgctgaggtttcc
gagtcatccatgattagcttgttgcagtcagatataaggcaagctcttaaagctgccttt
gcaaacatggatggcccattatcagtaattgattggtgcaggggtcgaggcaatgcagct
gagtcagttactgcagatgcatactcttttcagtactccactggtgataccctggagccg
tcaagttcactgcccattggtggagattctttgagcccaccccagccggcgagtagcaac
cgaggcatttcagaattagagtaccaaaagggatatcaccgtatcagaccaaccattgct
gtcctcccttcaccttctatgctagtcggttaccaggatgattggttaaaggcctcggtg
aatagtcttaaaacgtgggagaaagctccttttgaaccttatgccttgccgaagcctgtt
acttactatgcactttgccctgatattgatatgttgacttcagcagcagctgattttttc
atgcagcttgggacagtttatgaagtttgcaaactgggaactcattcaccacaaaacagt
ggaggacaaatggaactatcttctggaaaatatttgccttcaggacttgttctagttgag
tgtcctgaacagttgaagaaggttggctgcggccacttaagtcccatcacttcaacaagt
gactatcttcaagttttttcaaaacattggagtgtgaaaagctttgtaacatctatttca
aggatacttaaggatataaagctgacttcaaacatctctacgaatcagaaagagagcagt
agtggaccttgcacagtaatttatgtagtttgcccatttccagaaccttgtgcaattcta
cagacgttagtagaatgttctgttgctcttgggtatgttatttcatctccggaaagggaa
agaaagtcgctatattcgcaggttgccaaagccctaaacagcagtgcctctgcagatgaa
gcatcagcatcaaatgttgttatgctatccgggttcagtatacctaagctcgtcttgcag
attgttactattgaaactgtactgagaattgataagccaaacaaggagcttgctgttttg
aaggacatagcattcacagtatacaacaaggcacgacgtatcccgcgggctgtctccaca
agcgacatgtttcagtcaccaacttatttgggtagatctcagtccacaatgatgcatgtt
acatcacctgctcctactctttggaaagaatgtttagttcctcgaatgtctgggccaact
ctctctcgagaaacagattttgatgcatccatgaggtcggcaacatgggataactcatgg
cagcctgctcgttctggaggactgctggacccaagtaagatgccagatctatgtgctcag
gatgataggaaatatgcctttgagccacttttcatacttgcagaccctgggtctgctgat
cttaatgctttaatggaaccgtcaaaatctggagcagatgcaggtggcagcagggtttat
ggctccatgtcaggaagtaattctgatagtggagtgagccctctactcgatgtatctgag
agtgacagtgcagcaagtcttcattgctgttatggttggaccgaggactggcgatggtta
gtatgtatttggacagatgctagaggagaattattggacagcttaatatttccttttggt
ggtattagtagccgccaagacactaaagttctccaaagtcttttcatccaaattctacag
caaggttgtcaaataatgtcgtcttcacctgaggctagcaatatgagaccacgagatgtc
ataataactcgtattggaggtttccttgaacttgaaattcaagaatggcaaaaggcaata
tactcttttggtggtaatgaagtaaaaaagtggcctgtgcagttacggcgatccatacct
gagggtattccacctagttcaaatggtcctacactccagcagcaagacatggccttaatt
caagatagaaacatgccttcctcaccaaacccattgtacagccctcattcaaaatcaagc
ttcatgaaaggtgcacttggacaatctggcaacaaaaagcagatccttgtagaacaaacc
ggaatggatacttcaaggggaccactgcacttagttcgcagcatcagtttggttgcagtt
tcccaagatcattcgttgcatctcacatgccaaacagatctgttgacgagacctgcttct
ggcgaagggaatcaaggcagcagtggcctttcgagttacttggaaggtttcactccagtg
aagtccattgggtcaatgccagcatcacactcatatctcctagttccttcaccaagtatg
agatacctctctcctgcaacattacagctcccgacatgcctcacatcagagtcaccaccg
cttgcccatctattgcacagcaaagggactgcaattcccttagcaatgggctatgtcgtc
tcgaaagccgtcccacctgtaaggagggactctgcacagctcaccaaggatgaacaaccc
tctgttctcttagttagcatcattgatcactatggcggcagcattgccactgttcaagaa
aaaatgagccgaggcggtggtggcagcaacatgagcaaacaggcaaggaacttcactcag
gaaacaacaactcgtgactgtgaggtagagatgcataatgtgctggaagctgtggccacg
gagcttcactccctttcttggttgacagtaagcccggtgtacacagaaaggcggactgcc
ctgcccttccactgtgacatggtcctaaggatgcggcggcttctacactacgctgataag
tatctatctcaaccagcagagaagggagagacaacttag
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