Sorghum bicolor (sorghum): 8065417
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Entry
8065417 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
8065417
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8065417
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8065417
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8065417
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8065417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
8065417
NCBI-ProteinID:
XP_002437970
UniProt:
A0A921Q3K5
C5Z5I7
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All DBs
Position
10:complement(5218581..5225906)
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AA seq
917 aa
AA seq
DB search
MAEVSTAAAPEGVLHRRIEFHPARRPHASVAVGGGGFRMETLNPDAAGKAGAGAAVGSSE
GEATRSEKADAGGIDPELSVARIYLGRIGAGLENLGNTCYLNSVLQCLTYTEPFAAYLQS
GKHKSSCRASGFCALCALQNHVKTALESTGKIVTPFRIVKNLRCISRTFRNSRQEDAHEL
MVNLLESMHKCCLPSGVPSESQSAYDKSLVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDL
SLDIAKATTLVRALENFTEDELLDGGQKQYQCERCRQKVVAKKRFTIDKAPNVLTIHLKR
FSPFNPREKIDKKVDFQPSLDLKPFVSDSKGTDFKYSLYGVLVHTGWNTQSGHYYCFVRT
SSGMWHNLDDNKVRQVREADVLKQKAYMLFYVRNSIGKSVAHKENITANLPMKKTPEKIS
SLNGITQSSVKAQNLNGVSRFGDKAHNTIIGYSTIFSKTTTGHCSKNEVKAEDAPASQNN
ALPSRQAPGTQNDGGTLRTKPMQFDVNSQETASSHQPAPFTNTCGEQTVVGKPSQEMEPK
AGAGKDTSVVSAIANGAATLSKADKLTSQPQTTPFSEVAPHVNGTAAEFAARSLSKKDSV
VSNGVVPGIGCLTSSEKARNFPESVDQANEISKALPMSQNNIAPVIAQADCGVEISSGGI
MQVAVAASCNGTTAKKVNVKSSKKLVRYPVVNMWLGSRQLLFTSRKPGKKAKHKRSRTVR
RVVGCKDAANVSCLNEQLTSTSATARSETVECTSSRQKRSHASARSKDDTQSSKNKQKVD
GASVGAGTSAPSSSADIPKSDPSSSIGAKLVAAQPVSIRATDLMEATVPCWDDVDVPNTK
VAAGQHSKRKSIGYILDEWDEEYDKGKTKKVRKSKQDFGGPNPFQEEADYISERRMKQKS
YQGKSWNKPNTIEELRI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtttcgacggcggcggcgcccgagggggtgctgcaccggcggattgagttc
caccccgcgcggaggccgcatgcctctgtggcggtgggcggaggcgggttccgtatggag
acgctgaaccctgacgccgctggtaaggcgggggccggggcggcggttgggagcagcgag
ggggaggcgacgaggtcggagaaggcggacgccggcgggattgatccggagctcagcgtc
gccaggatctacctagggagaattggtgctggtttggaaaatcttgggaatacctgctac
ctcaactcagttctgcaatgcttgacgtacacggagccgttcgcagcctatctgcagagc
gggaagcacaagtcctcatgtcgcgcatctggattttgcgcattatgtgctcttcagaac
catgtcaagactgctctagaatcaactggaaaaatagtgacaccatttcgtattgtcaag
aacttgcgctgcatttctcgcactttccgcaattcaagacaagaagatgcacatgagtta
atggttaatttgcttgaatccatgcataaatgctgtttaccttctggggtaccgagtgag
tctcaaagtgcttatgacaaaagcttagttcacaaaatatttggtggtcgccttagaagt
caggtcaaatgcacgcgttgctcacattgctccaataaatttgatcctttcttggacctc
agtcttgatattgccaaggccaccactttagtgcgggcacttgaaaattttactgaggat
gagctactagacgggggtcaaaagcaataccagtgtgaacgctgcaggcagaaagttgta
gcaaagaaacggtttaccattgataaggcacccaatgtcttgacaattcatctgaagcgc
ttcagccctttcaatcctcgtgagaagattgacaaaaaagtggacttccaaccaagtctc
gatttgaaaccatttgttagtgactctaaaggtacagattttaaatacagcctttatggt
gtcctagtccatacaggttggaacactcaatcaggtcattactattgcttcgttcgtaca
tccagcgggatgtggcacaatcttgatgataacaaggtgcgccaagttcgtgaggcagac
gtattgaagcaaaaggcttatatgttattttatgtacgtaacagtattggaaagtcagtg
gcccacaaagagaacatcactgctaatttgcccatgaagaaaacccctgaaaagatctca
agtctgaatggtattacccaaagcagcgtaaaagcacaaaatttgaatggtgtgtctcgg
tttggcgataaggcgcacaacacaatcattggctactctacaattttcagcaagactaca
acaggccattgttcaaagaatgaggtcaaagctgaagatgctccagcctctcaaaacaat
gccctgccttccagacaagcccctggaactcaaaatgatggtggtaccttgcgaactaaa
ccgatgcagtttgatgtaaatagtcaggagacagcttcctcccaccaacctgcaccattt
acaaatacttgtggtgaacaaacagttgttgggaagccctcgcaggagatggaacctaag
gctggtgcggggaaagatacttctgttgtctctgccattgctaatggtgccgctacattg
tccaaggcagacaaactgacttctcagcctcaaacaactccattttccgaggtagctccc
catgtaaatggcacagctgcagagtttgctgcacggtctttatcaaagaaggattctgtt
gtttcaaatggtgttgtgcctggcattggatgtctcacttccagtgagaaagcaaggaac
tttccagaatctgtggatcaagctaatgaaatctcgaaggcacttcctatgagtcagaac
aatattgcgccagtaattgctcaagcagactgtggagtagagatcagctctggtggtatt
atgcaggttgctgtggctgcttcatgcaatggaactacagcgaaaaaggtgaatgtgaag
tcgtcgaagaagcttgtgaggtaccctgttgtgaacatgtggttagggtccagacaactg
ttgttcacttcgcgaaagccagggaagaaagcgaaacataagagaagtagaactgtaaga
cgtgttgtaggttgcaaggacgcagcaaatgtatcttgtttgaatgagcagctgacatca
acatcggccactgcacgctctgaaactgtagaatgtacctccagccgtcagaaacgatca
catgctagtgcaaggtccaaagatgacacccagtcctccaaaaacaagcagaaggttgat
ggagctagtgttggtgctggcacaagtgcaccttctagcagtgctgacattccaaagtct
gatccaagctcttccataggtgctaagttggtagcagcccagcctgtcagtattcgtgca
acggacctgatggaagctactgttccgtgctgggatgatgtagacgtgccaaatacaaag
gttgctgcgggccaacactccaaacgcaagagcattggttacatcttagatgagtgggac
gaggagtacgacaaagggaagacaaagaaagtacggaaatcaaagcaagactttggcggg
ccgaaccccttccaggaggaggcagactacatatcagagcggaggatgaaacagaaatcc
taccagggcaagtcttggaacaagcctaacactatagaggagttgagaatatga
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