Sorghum bicolor (sorghum): 8065461
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Entry
8065461 CDS
T01086
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8065461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8065461
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
8065461
U7-dependent histone pre-mRNA processing factors
8065461
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
8065461
NCBI-ProteinID:
XP_002437521
UniProt:
C5Z8U1
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All DBs
Position
10:58766425..58768238
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AA seq
225 aa
AA seq
DB search
MAAAAASCRCSSVVFVGNIPYHASEDELRAACEEIGPVVSLRVATDNKGGGSRRPRGFAF
VEYLDDETALSACRNLHGRALRGRDLRVGLAQRTPPPDVDEEPVGVEGATHAASLLHARP
RGAVTSYLAGLSRRQLRELLDALEREDAALMEHAKREFAGLSTLIEQARVLLDMASAPPG
AAVAKNRKRGARVQDRPGDSPESATQAPKLRRVQDGEHVPGVADR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgcctcgtgccgctgcagcagcgtggtgttcgtgggcaacatcccg
taccacgccagcgaggacgagctccgcgccgcgtgcgaggagatcggacccgtggtgtcc
ctccgcgtggccaccgacaacaagggcggcggcagccgccggcctcggggcttcgccttc
gtcgagtacctcgacgacgagacggccctcagcgcctgccgcaacctgcacggccgggcc
ctccgcggccgcgacctccgcgtgggccttgcgcagcgcacgccgccgccggacgtcgac
gaggagcccgtgggcgtcgagggcgccacgcacgccgcgtcgctactccacgcacgcccc
cgcggcgccgtcacgtcgtacctggccgggctgagccgccggcagctgcgcgagctgctg
gacgctctggagcgggaggacgcggcgctcatggagcatgccaagcgggagttcgccggg
ctgagcacgttgattgagcaggcgcgggtgctgctcgacatggcttcggcgcctcctggc
gccgccgtggctaagaacaggaaacgcggcgcgagggtgcaggaccggcccggtgattca
ccggagtcggcaacccaggcgccgaagctgagaagggtgcaggacggcgagcacgttcct
ggcgtcgccgaccgctga
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