Sorghum bicolor (sorghum): 8065609
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Entry
8065609 CDS
T01086
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8065609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8065609
Spliceosome [BR:
sbi03041
]
Complex B
Other components
Prp19-related factors
8065609
Complex C
8065609
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
8065609
NCBI-ProteinID:
XP_002437578
UniProt:
C5Z9E6
A0A921Q8B0
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Position
10:59706328..59708864
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AA seq
353 aa
AA seq
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MGREGVVAGPAAEGSKSRPECINSSNPYHECSDYCLRKIAEARQRLDDELPDSWKRPPEQ
RTVHPDCINASNPYHECSDYCFRRIADAKSGLERGEGQPPADVATAAGTSDAAEQQRPED
NDADKQEGAGADDGYLQMTEKQKKLFELRLKMNEARKANQQAMVAEKKRMEPRGESRGVS
KQKWLDDRKKKIGKLLDSNGLDMSKAYMLDTQETAETKYKKWEKEPAPYGWDVFNQKTLY
DAYKKRTKNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSNVPEENIDKMVKELKEREEK
RKSFSRRRKFNEDKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggggagggagggcgtggtggcggggccggcggcggagggtagcaaatcgcggccggag
tgcatcaactcgtccaacccgtaccacgagtgctccgactactgcctccgcaaaatcgcc
gaggccaggcagcgcctcgacgacgagctccccgactcgtggaagcgcccgccagagcaa
cgcaccgtccacccggactgcatcaacgcctccaacccctaccacgagtgctccgactac
tgcttcaggcgcatcgccgacgccaaatccgggctcgagcgtggggagggacagccacca
gctgatgtggccaccgctgctggcacgtccgatgctgcggagcagcagcgacctgaagat
aatgacgccgacaaacaggagggcgcaggcgcggatgatggttatctgcagatgaccgaa
aagcagaagaagctgttcgagctgcggcttaagatgaacgaagcgcggaaagcgaatcag
caggcaatggttgccgagaagaaaaggatggagcctcgcggtgagagccgaggtgtttct
aagcagaagtggctagacgacaggaagaagaagatcgggaagctgctggactccaatggg
cttgatatgtcgaaggcatacatgctcgatacgcaggagacggcagaaaccaagtacaag
aaatgggagaaggaacctgctccatatgggtgggatgttttcaatcaaaagaccttgtat
gatgcatacaaaaagaggaccaagaatatagaagtcgacatggaggcttacaataaagcc
aaggaagctgaccctgaattctaccgtgacgcctcaagtctccagtatgggaaggtatcc
aatgtcccagaagaaaacattgacaaaatggtcaaggaactcaaggagagggaagagaag
cggaaatcgttcagcaggaggcgcaagttcaatgaagacaaggatattgactcgatcaac
gaccggaatgagcacttcaacaagaagattgagcgtgcctttggcaagtacacgctcgag
atcaagaacaacctggaaagaggtactgccttgccagactaa
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