Sorghum bicolor (sorghum): 8065843
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Entry
8065843 CDS
T01086
Name
(RefSeq) protein LST8 homolog
KO
K08266
target of rapamycin complex subunit LST8
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04136
Autophagy - other
sbi04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
8065843
04136 Autophagy - other
8065843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8065843
Membrane trafficking [BR:
sbi04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
8065843
mTORC2 complex
8065843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_Nup120_160
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
ASA1
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Vps41
NBCH_WD40
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
Beta-prop_Aladin
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
PAC11
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_SPT8
PROPPIN
Beta-prop_IP5PC_F
SHKBP1_KCTD3_C
Beta-prop_RIG_1st
CFAP43_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_2nd
DmsR_N
KH_YLL032C_5th-like
Motif
Other DBs
NCBI-GeneID:
8065843
NCBI-ProteinID:
XP_002449784
UniProt:
C5Y5G8
LinkDB
All DBs
Position
5:65204194..65208380
Genome browser
AA seq
316 aa
AA seq
DB search
MAQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLAAAGNPHIRL
FDVNSNSPQPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTGTCQREYESRA
AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA
NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK
IWNVDGFKLERTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYQGHHK
ATVCCALHDGAESAPS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccttctgtcattctagctactgcaagttatgatcacacaatcagattttgg
gaagccaagagtggtcgctgttaccgcactattcaatatccagactctcaagttaatcgc
cttgagataaccccagacaagcggttcttagctgctgctggcaatcctcatatccgcctt
tttgacgtgaactcaaatagccctcaaccggtaattagctatgattcacatactagcaat
gtgatggctgtgggattccattgcgatggtaactggatgtactcaggttctgaagatggt
actgttagaatttgggatttacggactggcacttgccaacgagaatatgaaagtcgtgcc
gctgtcaacactgtagttctgcacccaaatcagaaagagctaatatctggtgaccagaat
ggaaacatacgtgtgtgggatttggctgctaactcatgcagctgtgagttggtaccggag
gttgatactgctgtaagatctctgacagtcatgtgggatgggagtatggtggttgctgca
aataaccgtgggacatgttacgtttggcgcctgcttaagggtactcagacaattacctgc
tttgaacctctgcacaaactgcaagcccatgatggctacattctgaagtgcctgctttca
ccagaattttgtgatcctaacaggtatcttgccacagcatcatctgaccacactgtaaag
atttggaatgtcgatggcttcaagttggaaagaactttagtcggccatcagcgctgggtt
tgggactgtgtgttctcggtcgatggtgcttatctgataacagcttcttcagacaccaca
gcgaggctatggacgatgtcaaccggagaggccatcagggtgtaccagggtcatcacaag
gccaccgtgtgctgtgctctccatgatggagctgaatcagcgccctcataa
DBGET
integrated database retrieval system