Sorghum bicolor (sorghum): 8065976
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Entry
8065976 CDS
T01086
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
8065976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8065976
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8065976
Enzymes [BR:
sbi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
8065976
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
8065976
Chaperones and folding catalysts [BR:
sbi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
8065976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
8065976
NCBI-ProteinID:
XP_002447438
UniProt:
A0A921QQB0
C5YBR7
LinkDB
All DBs
Position
6:complement(1550383..1553083)
Genome browser
AA seq
124 aa
AA seq
DB search
MSSAAGGDGETVRASHILIKHQGSRRKASWKDPDGRIISATTRADAAARLLDLRNQILSG
QANFADLAARHSDCSSARRGGDLGTFGRKQMQKPFEDATYALKVGELSEIVDTDSGVHVI
LRTA
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggcgggaggagacggggagacggtgcgggcgtcgcacatcctcatcaag
caccagggttcccgccgcaaggcctcctggaaggaccccgacggccgcatcatctccgcc
accacgcgcgccgacgccgccgcgcgcctcctcgacctccgcaaccagatcctctccggc
caggccaacttcgccgacctcgccgcgcgccactccgactgctcctccgcgcgacgcggc
ggggacctaggtacctttgggaggaagcagatgcagaaaccatttgaggacgctacatat
gccctcaaggttggtgagctcagcgagatcgtggacacggacagtggggttcacgtcatc
ctgcggactgcctga
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