Sorghum bicolor (sorghum): 8066270
Help
Entry
8066270 CDS
T01086
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8066270
03036 Chromosome and associated proteins [BR:
sbi03036
]
8066270
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8066270
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8066270
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8066270
microRNA pathway
RISC loading complex
8066270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
N_formyltrans_C
Motif
Other DBs
NCBI-GeneID:
8066270
NCBI-ProteinID:
XP_002465102
UniProt:
C5WVP1
LinkDB
All DBs
Position
1:62017061..62021926
Genome browser
AA seq
1152 aa
AA seq
DB search
MLLLLPPVPSLGRLGWLLSSPVPHLCVCHPINTSCSLSLSLSLSRGRGRGSHPLPSSARP
TLPPQLPPFCPPTFQPSKKPPQSQRPRRATPKGTQEAVILLPRKKLRSSTKYEQIGRLAM
EGEAAVAKNERKVGGGGGGVSNDGGANARRRCKGGGPGRHHPIIQAYPALLPLPLHAAAH
ARRSGAVALPLPLPPPVLVYLHQPPPPLLFPKVPACYGKPSGPPLLRGPPWRSRKPPPPP
HAVTAALLPLPHDTELIQHRKCFIHENQTSEMKANHLSTHHNSSITMHGVNIATRPDGGG
IGGTAIPLYANHFLVCFDPGQKIFHYDVDISPHPSKETARMIKNKLVEENSDILSGALPA
FDGRKNLFSPIQFQQDRLEFFVSLPAAASTRFIEAKDNAHMIDKQNHKVFRVNLRLVSKL
SGEELNKYLNEDKDGIPLPQEYLHALDVILREGAMENSIPMGRSLYPRSMGEAKEIGGGA
VMLRGFFQSLRPTKQGLALNVDLSLTAFHENTGIIAYLQKRCDFMKDLSQVKSRALTVDE
RREVEKALKNIRVFVCHRETDQRYHVHGLTEETTENLKFRDRSGKDYTVVDYFKEHYNHD
IKFRNLPCLQIGKSKPCYVPMELCMVCEGQKFLGKLSDEQTSKMLRMGCQRPSERKGIIK
GVVEGAFGTRSNSYADQFNLQVSKDMTQLLGRVLLPPKLKLGNGGRIKDITPDRFDRQWS
LMDSHVAEGSKIKSWALISFGGSPEHQSFIPKFINQLSSRCEQLGILLNKKTVVSPLFER
IQILNNVGILESKLKKIQEAASGNLQLLICVMERRHRGYADLKRIAETSIGVLTQCCLYS
NLSKLSFQFLANLALKINAKVGGSNVALYNSLPCQIPRVFSDKEPVMFMGADVTHPHPLD
DSSPSVVAVVASMNWPSANKYISRMRSQTHRKEIIERLDVMTGELLEEFVKEVGKLPSRI
IFFRDGVSETLFYKVLTEELQAVRLACSRYPGYKPAITFVVVQKRQHTRLFHREKNGGST
HYADQNVPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYRVLWDENNFKSDEMQQLI
HNLCYTFARCTKPVSLVPPAYYAHLAAYRGRLYLERSDSTATSRTTLYRATPLQTAPLPK
LRDSVKGLMFYC
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcctccttcctcccgtcccttccctcggccggctcggctggcttctctcctct
cctgtcccccacctctgcgtctgccatcccattaatacctcctgcagtctctctctctct
ctctctctctccagaggcagaggcagaggcagccatccccttccgagttccgcccgcccc
actcttcctccccagcttcctcctttttgcccccctaccttccaaccatccaagaaaccc
ccacaaagccagcgcccacgccgcgccacgccaaaaggaacccaagaagctgtgatcctg
ctgccccggaagaagctgcgtagcagtaccaagtacgaacaaattggacgcttggccatg
gagggtgaggcggcggtggccaagaacgagaggaaggttggcggcggaggaggaggcgtt
agcaatgacggtggcgcgaatgcgaggaggaggtgcaagggcggcggccccggcaggcat
cacccgatcatccaggcctacccggcgctcctgccgttgccgctacacgccgccgcccac
gcgcgccgcagcggcgccgtcgcgctgccgctgccgctgccgccgcccgtgctggtctac
ctgcaccagccgccgccgccgctgttgttccctaaggtgccggcgtgctacgggaagccc
agtgggcccccgctgctgagggggccgccgtggagatcgaggaagccgccgccgccgccg
cacgccgtcaccgccgcgctcctgccgctaccgcacgataccgagctgattcagcacaga
aagtgtttcattcatgagaaccaaacatctgaaatgaaagcaaatcatctgagcacccat
cacaattcatctatcaccatgcatggagttaacattgcaacaagacctgatggtggtggg
attggggggactgcaattcctctctatgcaaaccatttccttgtgtgttttgatcctggg
cagaagatttttcattatgatgtcgacatatccccacacccgtcaaaagaaacagcaaga
atgatcaagaacaagctagttgaagaaaattcagatatcctctcaggcgcccttccagcc
tttgatggccgcaagaatctatttagtcccattcagtttcaacaggacaggcttgaattc
tttgttagtcttccagcagctgcatcgacacgatttatagaagctaaagataatgcccac
atgattgacaagcagaatcataaggttttcagggtgaaccttcgattggtttcaaagcta
agtggcgaggagttgaacaagtatttgaatgaagacaaggatggtattcctcttcctcaa
gaataccttcatgcattggatgtcatcctgcgggaaggtgctatggaaaactctattccc
atgggccggtctttgtatccacgttcaatgggagaagcaaaggagattggtggtggagct
gtcatgttacgaggtttcttccagagcttgagaccaacaaagcaaggtcttgccctcaat
gttgacctctcacttacagctttccatgaaaacacgggcataattgcatacttgcagaag
cgctgtgactttatgaaggacctttcacaggtgaagagtagggctttgacagtagatgag
aggagggaggtggaaaaagcattgaagaatatccgagtgttcgtgtgccaccgtgaaact
gaccaaaggtaccatgtgcatggcttgactgaggagacaacagagaacctcaagtttcga
gatcgcagtgggaaggattatacggtcgtagattacttcaaagagcactacaaccatgat
attaaattcaggaacctgccctgcttgcagattggtaagagcaagccatgctatgtgcca
atggagctttgcatggtttgtgagggccagaagtttcttggcaagctctcagatgaacag
acctccaaaatgctcagaatgggctgccaaagaccaagcgaaagaaagggaatcataaag
ggtgttgttgaaggagcatttggtacaagaagcaattcgtatgctgatcaattcaacctt
caagtgtccaaggacatgactcagctcttggggagggttctcttgccaccaaaactgaag
cttggcaatggggggcgcatcaaggacataacaccagacagatttgaccggcaatggagt
ttgatggacagccatgttgctgagggttccaagatcaagagctgggccttgataagtttt
ggtggcagcccagagcatcaatcattcattccaaagtttatcaaccagctatcaagccgc
tgtgagcaacttgggattttactcaacaagaaaactgtcgttagcccattgtttgagcgg
attcaaatcctgaacaatgtgggcattttggagagcaagctgaagaaaatccaggaagcc
gcatcaggcaatttacagctgctaatctgcgtcatggagcggaggcaccggggctacgct
gatctgaagcgtattgcagaaacatccattggtgtcttgacacagtgttgcctgtattcc
aacctaagcaagctgagctttcagttcttggccaacttagcactgaagataaatgcgaag
gttggtggaagcaacgttgccctctacaacagcttgccatgccaaattcctagggtgttt
tcagacaaggagccagtgatgttcatgggtgctgacgtgacacacccacatcccctagat
gactcaagcccgtccgtggtcgctgtagttgcgagcatgaattggccttcagcaaacaag
tacatctccaggatgagatcacagacgcaccgtaaagagatcatcgagcgccttgatgta
atgaccggtgaactgctcgaggagtttgtgaaagaagtcggcaagctccctagcagaatc
atattcttcagagatggtgttagtgagacgctgttctacaaggtgttgacagaggagctg
caggcagtgcgactggcatgctcgaggtacccgggctacaagccagcgatcacgttcgtg
gtggttcagaagaggcagcacaccaggctcttccacagggagaagaatggcggctccacg
cactacgccgaccagaacgtaccaccgggaacggtggtggacaccgtgatcacgcaccca
agggagtttgatttctacctgtgcagtcactggggcaccaaggggacgagcaggccgacg
cactaccgcgtgctgtgggatgagaacaacttcaagtctgacgagatgcagcagctgata
cacaacctttgctacacgtttgcccggtgcaccaagcctgtttctctcgtcccaccggca
tactacgcacacctggccgcatatagaggaaggctataccttgagagatcggactcgacg
gcgaccagccggacaactctgtacagggccacgccattgcagactgcaccgctccctaag
ctcagagatagtgtgaaggggctcatgttctactgctga
DBGET
integrated database retrieval system
