Sorghum bicolor (sorghum): 8066347
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Entry
8066347 CDS
T01086
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8066347
Membrane trafficking [BR:
sbi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
8066347
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_1
bL31_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
8066347
NCBI-ProteinID:
XP_002443335
UniProt:
C5YPL6
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Position
8:complement(54815851..54832720)
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AA seq
1239 aa
AA seq
DB search
MANYLAQFQTIKSTCDRIVIAVEDVSDLWLNVKESFEQRVPVKKACLNNKARNPVFVDNL
PAEFIQTTDSRLRSRFPQEQYLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPSNDQATKMAKKVYARLEADFNTKKRERCCKFDLHGADKEFWDDFDSKM
VDCIRNTLDRRVQFYEEEIRRLSEQRFTPIWNFCNFFILKESLAFMFEMSNLHEDSLREY
DELELCYSESVNSPGKHREFGGLDTGDDQAALLNPGAKALTQIVQDDVFREFEFRQYIFA
CQAKLLFKLSRPIEVAARGYAFVVGFSKTLALHENALPFCFREVWVITACLGLIKSTSSH
YGDGSVAIDSEKEFYRLQGDLYSLCRVKFMRLAYLIGYGVEIEKSPVNSASLSMLPWPKP
ATWPSIPPDSSAEIMEKEKMVLQVKSREKLFSIHRKPLPLEPSLLLREANRRRAFLSVGN
LSELYDSSDASGLDANSKLPPNRPASNLMTRTMSGPATSETSLPVDRPMRLSEIHVAAEH
ALKQTISDPDFMTSLSSLEEFEKRYMELTKGAADNYHRSWWKRHGVVLDGEIAALFFKHG
NYDLAVKSYEKVCALYSAEGWEELLADVLPDLAECQKILNDEAGYLSSCVKLLSLDSGLF
SSKERQAFQSEVVRLAHSEMKHLVPLDVSSLITFAGNAGPPLELCDGDPGTLSVAVWSGF
PDDITLESLSLRLSASSSADEGIKAIKSSDSHVLVPGRNIISFNIPPQKPGSYVLGALTG
QIGKLSFRSHGFSQDGPVETDEFMSFEKPTRPVLKVRKPRALVDITPAVSSALLMNELQW
IGLIVKPIDYSLKGGILHIDAGAELKIEESQMIEIEIYGSDVECANSANGSIEAGKVEKI
PIENGKIKLPDWASDVTTLVWFPVRAIDDTIARGESPVSQKQSVVDGMRMIALKLEFGVF
HNQVFERTIAVHFTNPFHVSTRVVDKCNDGALLLQVILCSEVKATLHVKDVRLDLQSGFE
HLGKGDGRPALSLFPLVIAPSSKAGILFMIRLSGTKDADEAENADSMLNITYGISGDRTT
GAHSPVPVKSGDSEELLFKIALRLKRPVLDPCLAVGFLPFSTDCLRVGQLVNMRWRVERL
KTPEDASISVDELLYQVEANPQNWMVAGRKCGHVSLSNEQGSRMEIMVTCVPLVSGYVHP
PQLGLPEVGEANISCNPAGPHLVCVLPPALSTSYCIPAA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacctcgcgcagttccagaccatcaagtccacctgcgaccgcatcgtcatc
gccgtcgaagatgttagtgacttgtggctaaatgtcaaggaaagttttgaacaacgagtg
ccagtgaagaaggcctgtctcaacaacaaggcaaggaaccctgtttttgttgacaatcta
ccagctgagtttatacaaactactgattcaagactacggagtcgattcccacaagaacaa
tacttgttctggttccgggagccatatgcaactgttgttcttgttacttgtgaggatctt
gatgaattcaagaccattcttaagcctcgcctcaaattaattgtgcaaaatgatgaacga
gaatggttcattgtgtttgtgtcgaaggcccatcctagcaatgatcaagcaactaagatg
gcaaagaaagtatatgctaggctggaggctgatttcaacaccaaaaagagagagagatgc
tgcaagtttgatctccatggagcagacaaggaattctgggatgattttgactctaaaatg
gtggactgcatcagaaacactttggataggcgggttcagttttatgaagaggaaatacgg
aggttaagtgagcaacggttcactccaatatggaacttctgcaacttcttcattctgaag
gaaagcttggcattcatgtttgagatgagtaatcttcatgaagattcactccgtgaatat
gatgaacttgaactatgctattcagaatcagtgaactctccagggaaacatcgtgaattt
ggtgggctagatactggggatgaccaggctgcactgctaaatccaggagccaaagcactt
acccaaattgttcaggatgacgtattcagagaatttgagtttaggcaatacatatttgct
tgccaggctaagctattgtttaaactgtctcgcccaattgaggttgctgccagaggatat
gcttttgttgttggcttttccaagacactagccttgcacgaaaatgctctaccattttgc
ttccgtgaagtatgggtgataactgcatgcttgggtttgataaagtctacgagttcgcat
tatggtgatggatctgttgctattgactcagagaaagagttctatcgtcttcagggtgat
ctttattccctctgtcgtgttaagtttatgaggcttgcttacttgattggttatggggtt
gagatagaaaagagtccagtcaacagtgcatctttaagcatgttaccatggccaaagcca
gctacatggccttcaatccctcctgattcatcagcagaaataatggaaaaggagaagatg
gttcttcaagtcaaatcaagagaaaagctcttcagcattcacaggaaacctctgccatta
gaaccttctttacttctacgtgaggctaataggcgcagggcttttctctctgttggaaat
ctatccgagctgtatgattcatctgatgcttcaggtttagatgcaaattcaaaacttcct
cccaacagacctgcttctaacttaatgacaagaacaatgtcaggtccagcaacgtccgag
acttcactgccagttgatcgtcccatgaggttgtcagaaattcatgttgcagctgagcat
gcactgaaacaaacgatatcagatcctgattttatgacatcactttcatcactagaagaa
tttgagaaaagatatatggagcttactaaaggtgctgctgacaattaccaccgctcttgg
tggaaaagacatggagttgttcttgatggagagattgcagctctgttctttaagcatgga
aattatgacctagctgtgaaatcctatgagaaagtttgtgctctctattctgcagagggc
tgggaagagctgttggcagatgttcttcctgatcttgcagaatgccagaagattcttaat
gatgaagctggttatttgtcttcttgtgtaaagttactttctctggacagtggcttgttt
tcatctaaagagcggcaagctttccagtcagaagttgttcgacttgctcacagtgaaatg
aaacatcttgtgccccttgatgtctcatcactaattacatttgctggaaatgctggtcca
ccactagaattatgtgatggagatcctggtacactatctgtagcagtttggagtggcttc
ccagatgacatcacactggagtctctcagtttaagattgtcagcttcttctagtgcagat
gaaggtatcaaggcaattaaaagttcagattctcatgttctcgtaccaggtagaaatatc
atctcttttaacattcctcctcaaaagcctggctcctatgtgttgggtgctctcactgga
cagattggcaaactgtcattcagatcgcatggattttctcaagatggtccagttgaaact
gatgaatttatgagctttgagaagccaacaagacctgttttgaaggtgagaaaaccaagg
gctttagttgatattacacctgctgtgtcctctgcattgcttatgaatgagctccaatgg
attggattaattgttaagccaatagactattctttaaaaggtggcatattgcatatcgat
gctggtgctgaactgaaaattgaggagtctcagatgattgaaatagaaatttacggaagt
gatgtggagtgtgctaattctgccaacggctccattgaagctggaaaggttgaaaagatc
cctattgaaaatggaaagataaaacttccagattgggctagtgatgtgactactcttgtt
tggtttcctgttcgtgctattgatgatacaattgccagaggcgaatccccagtgtctcag
aaacagagcgttgtagatgggatgagaatgattgctctcaagcttgagtttggagttttc
cataatcaagtgtttgaaaggaccattgcagtccattttactaacccattccatgtaagc
acacgcgttgtggacaagtgcaatgatggagctctacttctacaggtgatattgtgttct
gaagtgaaggccacactgcatgtaaaggatgtacggttagatcttcaatctggatttgag
cacttgggcaaaggagatggacggccagctttgagtttattccctctggttattgctcct
tcttccaaagctggaattttattcatgatacggttaagtggtacaaaggatgcagatgag
gcagaaaatgcagacagcatgctgaatatcacttatgggatatctggtgacagaacaact
ggagcacattctcctgtacctgtcaaatctggtgactctgaagagcttctgttcaagatt
gcacttagactgaagcgacctgtcctggatccatgtctagcagttggattccttccattt
tctactgactgcctgagggttgggcaattagttaatatgaggtggagggtcgaaaggctg
aaaaccccggaggatgcatccatatctgtcgacgaactactttatcaggttgaggcaaac
ccgcagaactggatggttgctgggaggaaatgtggtcacgtatcgttgtcaaatgagcaa
ggttcaaggatggagatcatggtgacatgtgtgccgctggtgtctgggtacgtccaccca
ccgcagctgggcctgccggaggtgggcgaggcaaatattagctgcaacccagcagggcct
cacctggtgtgcgtccttcctccagccctcagcacctcctactgtatacctgcggcatga
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