KEGG T01086: 8066366

Sorghum bicolor (sorghum): 8066366

Entry

8066366           CDS       T01086

Name

(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B

K03017

DNA-directed RNA polymerase II subunit RPB9

Organism

sbi Sorghum bicolor (sorghum)

Pathway

sbi03020

RNA polymerase

sbi03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:sbi00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8066366
  09124 Replication and repair
   03420 Nucleotide excision repair
    8066366
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8066366
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8066366
Transcription machinery [BR:sbi03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     8066366
DNA repair and recombination proteins [BR:sbi03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8066366

SSDB

Motif

Pfam:

RNA_POL_M_15KD TFIIS_C zinc_ribbon_4 CpXC DNA_RNApol_7kD

Other DBs

NCBI-GeneID:

8066366

NCBI-ProteinID:

XP_002443356

UniProt:

A0A921QI39 C5YPS4

LinkDB

Position

8:complement(55494020..55495285)

AA seq 114 aa
MSTMKFCRECNNILYPKEDREQKVLLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ
DVAGDPTLPRTKSVRCASCGHGEAVFFQATARGEEGMTLFFVCCNPSCGNRWRE

NT seq 345 nt +upstreamnt +downstreamnt
atgagtaccatgaagttttgccgtgaatgcaacaacatcctgtaccccaaggaggaccgg
gagcagaaggttctcctctacgcctgccggaactgcgaccaccaggaggtcgccgacaac
aactgcgtgtaccggaacgtggtgcaccacagcgccggcgagttcacccaggtgctccag
gacgtcgccggcgaccccacgctgccccgcaccaagtccgtccgctgcgcctcctgcggc
cacggcgaggccgtcttcttccaggcgactgcaagaggcgaggaggggatgacgctcttc
tttgtctgctgcaacccgagctgcggcaaccgctggagagaataa

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