Sorghum bicolor (sorghum): 8066449
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Entry
8066449 CDS
T01086
Name
(RefSeq) protein argonaute 1C isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbi03019
]
8066449
03036 Chromosome and associated proteins [BR:
sbi03036
]
8066449
Messenger RNA biogenesis [BR:
sbi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8066449
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8066449
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8066449
microRNA pathway
RISC loading complex
8066449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
8066449
NCBI-ProteinID:
XP_002454847
UniProt:
C5XWS2
LinkDB
All DBs
Position
4:complement(68451159..68459101)
Genome browser
AA seq
1028 aa
AA seq
DB search
MGSRRGRQHPGAGHAAQPPQPGGRGAARAQQPPPQPAAGRGGGGGRGGIQQQGRGGGRTS
RGGSGAWRPRGAGATPLQGAASSSSPFAPELRQAMEEAPRELAPQAPPVQAAGPSQPSPE
APPPVQPRETVPTGPTAGQEIIVPTAPPQSSKSFRFPLRPGKGSIGTRCLVKANHFFAEL
PDKDLHHYDVSITPEVTSRVVGRAIIKELVNLYKQSYLGGRLPAYDGRKSLYTAGPLPFT
SQEFHITLFDDDGGPGSERRRRNFKVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDI
VLRELPSSRPRYAPFGRSFFSPDLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSAT
AFIEPLPVIEFVAQLLNCEIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRKYRISGLT
TQATRELTFPVDEGGTIKSVVQYFQETYGFSIQHTYLPCLQVGNQQRPNYLPMEVCKIVE
GQRYSKRLNQNQIRALLEETCQHPRDRERDIIRMVKQNAYDKDDYAQEFGIKISDRLASV
EARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVDGGKVRSWICVNFARNVQDSVVRG
FCHELALMCQASGMDFAREPVLPPLYARPDQVERALKARYHDAMNVLGPKHKELDLLIGI
LPDNNGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNNKQILANLALKINVKVGGRNTVLV
DAVSRGIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHR
QELIEDLYKVWQDPQRGTVSGGMIRELLVSFKKSTGEKPQRIIFYRDGVSEGQFYQVLLY
ELNAIRKACASLEAEYQPKVTFVVVQKRHHTRLFAHNHNDQNSIDRSGNILPGTVVDSKI
CHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCYTYARCTRSVSIV
PPAYYAHLAAFRARFYMEPETSDSGSVASGPAGRGPQSASHSTRAPGGAAVRPLPALKDN
VKRVMFYC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggaggggaaggcaacatcctggtgctggccacgccgcgcagcctccgcag
ccgggcgggagaggcgctgctcgtgctcagcagcccccgccgcagcctgctgcaggaaga
ggaggaggaggaggtcgtggagggatccagcagcaggggcgaggtggaggccgcacgtct
cgtggcgggagtggagcgtggcgcccacgtggtgctggtgctacacctctgcagggggct
gcctcgtcatccagcccttttgctcccgagctgcgccaagcaatggaggaggctcctcgt
gagctcgcaccacaagcgccaccagtgcaggcggcaggtccttcgcagccatcgccagag
gctcccccgcctgttcagcctagagagactgtgcctactgggcccactgcaggccaggag
attattgtgcctaccgcacctccacaatcaagcaagtcattcaggtttcctttgcgccca
ggaaagggcagtattggcaccaggtgcctggttaaggccaaccatttctttgctgagctg
ccagacaaggatcttcatcactacgatgtctcaatcacaccggaagttacctcaagggtt
gttggtcgagccatcatcaaggagctggtcaatctctacaagcaatcttacttgggtggg
aggctaccggcctatgatggtaggaagagcctgtacacagccggcccactgccgtttact
tcacaggaatttcatatcactttatttgacgatgatggtggccctggttccgagaggcga
cgtaggaatttcaaagtagtcattaaatttgctgcacgagctgacctccaccgcctcgag
ctctttttagctgggaggcatgcagaagctcctcaagaggcattgcaggttctggatatt
gtgctgcgggaactgccttcatcaaggccaagatacgcaccatttggccggtcattcttt
tcgcctgacttgggccgaaggcagccccttggtgatggattagaaagctggcgtggattc
taccagagcattcgtcctactcaaatgggcttgtcactcaacattgatatgtcagcgaca
gctttcattgagccattgcctgtaatcgaatttgttgcacagctgcttaattgtgaaatt
cactctaggccactctcagacgcggaacgggtgaagatcaagaaagccttgcgaggagtt
aaggtggaagttactcatcgtggaaacatgcggagaaagtatcgaatatctgggttaaca
actcaggcgactcgagagttaacctttcctgttgatgaagggggtacaataaagtcagtt
gtacaatactttcaagagacatatggattttccattcaacacacctaccttccttgcctt
caagttggcaatcaacagcgtccaaattacttgccaatggaggtctgcaaaatagtggag
ggacagaggtactccaagagattaaaccagaatcagatcagagctcttttggaggagaca
tgccagcacccacgcgatcgtgagcgtgatataattcggatggttaaacagaatgcctat
gacaaggatgattatgcacaagagtttggcattaagattagcgatcgtctggcatcagtt
gaggcacggattttgccagctccacggcttaagtacaatgagactggtcgagagaaggac
tgcttacctagggttggtcagtggaatatgatgaacaagaaaatggtagatggtggtaag
gtcagaagttggatatgtgtcaattttgctcgcaatgtgcaagacagtgttgttcgtggg
ttctgccatgaacttgcactgatgtgccaagcgtcaggaatggatttcgctcgggagcct
gttcttccacctctatatgcacgtcctgatcaagtggagcgagctctgaaagctaggtac
catgatgccatgaacgttcttggacccaaacacaaggaacttgatttacttattggaata
ctacctgacaacaatggctcactttatggtgatttgaagcgtgtctgtgaaatagatctt
gggatagtttcacagtgctgttgcacaaagcaggttttcaaaatgaacaacaaacaaatt
cttgcaaatcttgctctgaagattaatgtgaaggttgggggcaggaacaccgtgctggta
gatgccgtctcaaggggaattcctctggtaactgatcgacctacaatcatatttggtgct
gatgtgactcatcctcatcccggtgaggacagtagtccctcaattgctgctgttgtggcc
tcccaagattggccagaggtgacaaagtatgctggactagtttgtgctcaagctcatcgg
caagagttgatagaggatttgtataaggtctggcaagatccacagagagggacagtcagc
ggtggaatgataagggagctacttgtatccttcaaaaaatcaactggtgagaagccccag
cgaataatattttacagggatggtgtcagtgaaggacaattttatcaagttctgttgtat
gagctcaatgctatccgaaaggcctgtgcctccctggaagcggagtaccaaccaaaggtg
acttttgttgtggttcagaagcgccatcatactagattatttgctcacaaccacaatgat
cagaattcaattgacaggagtggaaacatactcccaggtactgttgtagattcgaagatc
tgtcatcctactgaatttgacttctacttgtgtagccatgctggcattaagggcactagc
cgtccagctcattatcatgtcttgtgggatgaaaacaacttctctgctgacgagttgcag
actcttacaaacaacctctgttacacttatgcaaggtgcacccgctctgtatcgatcgtt
ccaccagcgtattatgctcacctggctgccttcagggctcgtttttacatggaaccagag
acttctgacagtggatcggtggcaagtggtcctgcaggccgtggacctcagtcagcatcc
catagcactcgggcccctggtggtgcagctgttaggccacttccagctctgaaggataac
gtaaagagggtcatgttctactgctga
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integrated database retrieval system
