Sorghum bicolor (sorghum): 8066458
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Entry
8066458 CDS
T01086
Name
(RefSeq) SEC1 family transport protein SLY1
KO
K19998
sec1 family domain-containing protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8066458
Membrane trafficking [BR:
sbi04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
8066458
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
8066458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Bclt
Motif
Other DBs
NCBI-GeneID:
8066458
NCBI-ProteinID:
XP_002453107
UniProt:
C5XWT6
LinkDB
All DBs
Position
4:68561930..68564375
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AA seq
626 aa
AA seq
DB search
MAALSLRQKQLDLILRMLHLNQPPPPPGAAAEQEEEVYKILVLDTFCLSLLSPLLRVADL
RKHGVTLYFPIDKPRQQVADAPAVYFLRPTQANADRVAADAAASLYASFHLNFSSALPRP
LLDRLAAATAASGSAHRVARLADQYLDFVSLEDNLFSLAHPRSYVALNDPKAADADIEAL
VDAIALGLFCVAATLGTVPVIRCPRGGPAEMVAAALDARLRDHLLAKPNLFTEASASVAS
FQRPVLCLFDRNFDLSVGIQHDWSYRPLVHDVLGLKLNKLKMPADKSGPAKTYDLDGSDA
FWVANSWSPFPRVAEEIESQLAKYKQDVDEVNQRTGGSKDGIEFDGTDLIGNTKHLMNAV
NSLPELTERKKMIDKHTNIATVLLGHIKERSLDGYCDCENDMLTKGTVDRSALLGLLRGK
GTKEDKLRLAVTYLLSFETPVASELEQVEAALREAEVDMSAFQYVKRVKSLNTQFSASSN
TATRSNIVDWAEKLYGQSISAVTAGVKNLLSTGRQLALTRTVEALMEGKPNPEVDSYLLF
DPRALRSGSGGQFKGPFREAIVFMIGGGNYIEYRSLMELAECSQPSKHVIYGATEIVNGV
EFIEQLAELGQKAGLCGGVNNPPPLQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcagcctccgccagaagcagctcgatctgatcctgcggatgctgcacctc
aaccagccgccgccgccgcccggcgcggccgcggagcaagaagaggaggtgtacaagatc
ctggtgctggacaccttctgcctctcgctgctctcgccgctgctccgcgtcgctgacctc
cgcaagcacggcgtcaccctctacttccccatcgacaagccgcgccagcaggtcgccgac
gcccccgccgtctacttcctccgtcccacccaagccaacgccgaccgcgtcgccgcagac
gccgccgcctcgctctacgcatccttccacctcaacttctcctccgcactcccgcgcccg
ctcctcgaccgcctcgccgccgccaccgccgcctccggctctgcccaccgcgtcgcccgc
ctcgcggatcagtacctcgacttcgtctctctcgaggacaacctcttctccctcgcccac
ccgcgctcctacgttgccctcaacgaccccaaagcggccgacgccgacatcgaggccctc
gtcgacgccatcgcgctcggtctcttctgcgtcgcggccacgctcggcaccgtgcccgtc
atcaggtgcccccgcggaggccccgctgagatggtcgcagccgccctcgacgcccgcctc
cgggaccacctcctcgccaagcccaacctcttcaccgaggcctcagcctccgtcgcctcc
ttccagcgccccgtgctctgcctcttcgacaggaacttcgacctctccgtggggatacag
cacgattggagctaccgccccttggtccatgacgtcctcggcctcaagctcaacaagctc
aagatgcccgcagacaagtctggccccgccaagacctacgatctcgatggctccgatgcc
ttctgggtggcaaacagctggtcaccgttccccagggtggccgaggagatcgagtcacag
ctcgccaagtacaagcaggatgtggatgaggtgaaccagcgcactggtggcagcaaggat
ggtatcgagtttgatggcacggatctcattggcaacaccaagcacctcatgaatgccgtg
aactcgctcccagagctcacagaacgcaagaagatgattgacaagcacacaaatatcgca
acagtgttgcttgggcacatcaaggagagatcgctggatggatactgcgactgcgagaac
gacatgctcacgaagggcaccgtggacaggagtgcgctgttgggcctcctccgagggaag
ggcaccaaggaggacaagctccgtctggctgtgacctacctcctctcttttgagactcct
gttgcgtccgagctggagcaggtcgaggcggcgctgcgtgaggcagaagtggacatgtct
gcgtttcagtatgtcaagagagtaaagtcactgaatacacagtttagtgcctcgtcaaac
acagccaccaggagtaacattgttgattgggcagagaagctgtatgggcagtccattagc
gcggtgacggcaggggtaaagaatctcttgtccaccgggaggcagcttgcattgacaaga
acggttgaagctctcatggaagggaagccgaatcctgaggtggacagctatttgctgttt
gatccacgggcccttagatcaggaagtggtgggcagttcaaagggccattcagagaagca
attgtcttcatgattggtggtgggaattacattgagtacaggagcttgatggagctggca
gaatgctcgcagccttcaaagcatgtcatatacggtgcaaccgagattgtcaatggggtg
gagtttatcgagcaacttgcagaattggggcagaaagcagggctgtgtggtggtgtcaac
aaccctccaccgctacagtaa
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