Sorghum bicolor (sorghum): 8066511
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Entry
8066511 CDS
T01086
Name
(RefSeq) ATP-dependent helicase BRM isoform X3
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8066511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8066511
03036 Chromosome and associated proteins [BR:
sbi03036
]
8066511
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8066511
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
8066511
Chromatin remodeling factors
BAF complex
8066511
PBAF complex
8066511
GBAF(ncBAF) complex
8066511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
Bromodomain
AAA_14
Motif
Other DBs
NCBI-GeneID:
8066511
NCBI-ProteinID:
XP_002453160
UniProt:
C5XS82
LinkDB
All DBs
Position
4:complement(820025..845789)
Genome browser
AA seq
2166 aa
AA seq
DB search
MQPSGGPSGSSRGSPASSPHPDQQQPPTPASAQQQAQQLGFRGQGMMHHHEQQQAFQSGA
PHAMMGPGGVSFPQSSGPVSPFQGQRNLPMSGGPQGMVGGQVHNQVAMQQQFLKLAMQQQ
QQKAAQGMLLQQQQAKMNMVGSSSRDQDMLNNPAKMQELMALHQAQAQAQMFKRQCEQKE
QGQSSSSEQRSGDMRPPMPPQGVPGQQLPSMGMIRPMQPVQGQVGMGSAGGGPITPAQFQ
AIQAWAKEHNFDLSNPANMSAISQLLPIWQANRMAAMQKQNEANMAAQQQAMPSQVNSDT
PGHGNAPSQGALLKPRQPLPPSSVSGGEEAKVVNPSNLQLQQQLSVHNRDGSNERAVRSP
MTGGNSAQTMHIPQSSGHVSKVPEQSNPKNVLSNSEAMQMQHVRQMQQLNQPAAPTSTPG
EAGGSQVSTPSARPQTGQTGFTKNQLHVLKAQILAFRRLKRGDRLPPEVLELIVSGRPPD
SQGGPQQVSGPQATHNREKPGVSNADEHGRQMESGDKAPEKPALLKGPCLPKVEVSASED
KASPASGPGPMQVMKASPKEPLKIGPVSVPEHSNTTVIKSEQELERSIQRTPGRSDYNAE
RGKSVPAESGSADAEQAKRTGSTSSAPAPRDVPRKYHGPLFDFPSFTRRHDSMGPANYNS
NLSLGYDVKDLLAQEGMIVLGKKREDNLKKISGLLAINLERKRIRPDLVLRLQIEEKKLK
LLEHQARLRDEVEHEQQEIMAMPDRIYRKFVRQCERQRVELARQVQQMQRASREKQLKSI
FQWRKKLLEAHWAIRDARITRNRGVAKYHERMLREFSKKKDDDRNKRMEALKNNDVERYR
QILLEQQTSVPGDAAQRYNVLSSFLTQTEEYLYKLGGKITAAKSQQQVEEAANAAAAAAR
AQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRDNTSVNKYYTLAHAVSERVTKQPSLLR
AGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV
PNAVLVNWKSELLNWLPSASCIFYVGAKDQRQKLFSQEVMAMKFNVLVTTYEFVMFDRSK
LSRVDWKYIIIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLP
EVFDSSKAFSDWFSKPFQRDGPTHSEEEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV
EGSLPRKDSIVLRCRMSAVQGAIYDWIKSTGTIRVDPEDEKRRAQRNPMYQVKTYKNLNN
KCMELRKVCNHPLLTYPFLNHGKDFMIRSCGKLWNLDRILIKLHKAGHRVLLFSTMTKLL
DIMEDYLQWRRLVYRRIDGTTSLEDRESAIVDFNRPGSDCFIFLLSIRAAGRGLNLQSAD
TVVIYDPDPNPQNEEQAVARAHRIGQTREVKVIYMEAVVDNISSYQKEDELRNGGSADLE
DDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEER
YQDSVHDVPSLQEVNRMIARTESEVELFDQMDEDFDWTGDMTKHHQIPKWLRVNSTEVDA
VVASLSKKPSRNMSSGGIALDTNETPEKRRGRPKGTGKYSIYREIDDEDLEESDEDSEER
NTASLPEEGEVGEFEDEDNDDSIPDNKDESEEEPVNDDVYEFTEGLRSRKANRMEEAGST
GSSSGSRRLPPPVPSSSSKKLRSLSALDARPVSSSKRTPDDLEEGEIAMSGDSHMDLQQS
GSWNHERDDGEDEQVLQPKIKRKRSIRLRPKPNAEKQEDRSGEGVFPQHAARQQDTVHPI
VKQKRNMPSRKVSPASRSGKLTYMSGSGEGSAERSKENWNSKAIDSTPPEFRGTKMSDSM
QRKCKNVISKLWRRIDKEGHQIIPNISSWWRRNENSSFRGPAGSTLDLQKIEQRVDGFEY
GAVTEFIADMQQMLKSVVQHFSYRHEVRIEAETLHNLFFNIMKIAFPDSDFSEAKNAMSF
SNPGGAASGAAAQSSKHTASVHKRRASASEAEQHGSGHSRHNQSSEVPSRPHSSRSERDP
RHSGSSSRDQLQDGAGLLHPSDMFIVKKKRQDRARSSIGSPSSSGRAGPLSPANPGRPGP
VPSPRGARTPFQRDPHPSQQSMHSAGWGAHSDQGGSSSAPGIGDIQWAKPAKRLRTDSGK
RRPSLM
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccagcggggggccctccggcagctcccggggctcgccagcgtcgtcgccgcac
ccggaccagcagcagccgccgaccccggcgtccgcgcagcagcaggcgcagcagctaggg
tttagaggccagggaatgatgcatcaccatgaacagcagcaagccttccaatctggtgcg
ccgcatgccatgatgggaccagggggtgtgagcttccctcagtcgtctggtccagtgtca
ccgttccagggtcagaggaacctgccaatgtcaggtggaccgcagggcatggtcggtggt
caggtgcacaatcaggttgcaatgcagcaacagttcctgaagcttgcgatgcagcagcag
cagcagaaggcggcccaggggatgctcctccagcagcagcaggccaagatgaatatggtg
ggttcatcctcaagagaccaggacatgcttaacaaccctgccaaaatgcaggagcttatg
gcccttcatcaggcccaggcccaggctcagatgtttaagcggcagtgtgagcagaaagag
caggggcaatcaagcagtagtgagcaaagaagtggcgatatgaggcctcctatgcctcct
caaggagtccctggacagcagttgccatcaatgggtatgatcaggcccatgcagccagtg
caaggccaggtgggcatgggcagcgccggtggcggcccgataacacctgcgcagtttcaa
gccatccaagcctgggcaaaagagcacaactttgacctgtccaatcctgcaaacatgagt
gcaatttctcaactcctgccaatctggcaggccaacaggatggcagctatgcagaagcag
aatgaggcaaacatggctgcacagcagcaagcaatgccctctcaggtgaacagtgacacc
ccagggcacggtaacgctccaagccagggtgccctactgaagccccggcaaccccttccc
cccagctcagtttctggtggagaagaggctaaggtagtgaatccgagcaacttgcagttg
caacagcagttgtctgtgcacaacagggatggttcaaatgaaagggctgtgaggtcacct
atgacagggggcaatagtgcccaaacgatgcatatcccccaaagttctggacatgtgagt
aaggttcctgagcaatccaatccaaaaaatgttctttcaaattcagaagcaatgcagatg
cagcatgtcagacagatgcaacagcttaaccagcctgctgcccccacatctacccctggt
gaagcaggaggatcacaggtctcaactccaagtgctcggccacaaacagggcaaacgggt
ttcaccaaaaatcaacttcatgtactcaaggctcagatattagctttccggcgtttaaag
cgtggtgatcgactcccgcctgaagttcttgaattaattgtatctggccgccctcctgat
tcacaaggaggaccgcaacaagtttcaggacctcaggcaacacataatcgtgaaaagcct
ggtgtaagcaatgctgatgaacatggaaggcagatggagagtggtgacaaagctcccgaa
aaacctgcattgttgaagggaccctgtttaccaaaggtggaggtttctgcttcagaagac
aaagctagtcctgccagtggtcctggtcccatgcaagtgatgaaagcttcaccgaaagaa
cctcttaaaattggaccagtttctgtaccagagcatagtaacactactgtgattaaatct
gagcaggagcttgaacggagtatccagagaacacctgggagaagtgattacaatgctgag
aggggtaaatctgtaccagcagaaagtggttcagcggatgctgagcaggcaaaaaggact
ggctccacaagcagtgccccagctccaagagatgttcccagaaaataccatggcccatta
ttcgatttcccgtccttcactaggagacacgattcgatgggacctgcaaattacaacagc
aatctgtcactaggttatgatgtgaaagatttgttagctcaggaggggatgatagttctt
ggtaagaaacgtgaggataacttaaaaaagataagcggtttgcttgcaattaatctagag
aggaaaagaatccgacctgatcttgtcttgaggctacagattgaagaaaagaaactcaaa
ctcctagagcatcaggctcgtctaagggacgaagttgagcatgaacaacaagaaattatg
gcaatgccagataggatatacagaaaatttgtcaggcaatgcgaacgccaacgtgttgag
cttgcaaggcaagttcagcagatgcagagagcttcaagagagaagcagctgaaatccatt
ttccagtggcgcaagaagcttttggaggcacattgggccattcgtgatgctcgaataact
cgtaatcgaggggtggccaagtaccatgaaaggatgttgagagaattctcaaagaagaaa
gatgatgatcggaacaaaagaatggaggcattgaaaaacaatgatgtggaaagataccgt
caaatattgttggaacagcagactagtgttccgggtgatgcagctcaaagatacaatgtc
ctatcttctttcttgacccagactgaagagtacctttataaactaggaggaaaaataact
gctgccaagagtcagcaacaagtagaagaggcagcaaatgctgcagctgcagctgcacgg
gcacagggcctgtctgaggaagaagtgaaggctgctgcacaatgtgctggtcaggaggtt
atgataaggaacacattctctgagatgaatgcgccaagggataatacatctgttaacaag
tactatactttagcccatgctgtaagtgagagagttacgaagcagccatcactgttgcga
gcaggaactttaagggactaccaactggtgggcctacagtggatgctttctttgtacaat
aataagttgaatggcattttggctgatgagatgggtcttggcaagactgtacaggtcatg
gcattgattgcgtacctgatggaatttaaagggaattatggccctcatctcataatagtg
ccaaatgctgtcttggtcaattggaagagcgagctgctaaattggttaccatctgcatct
tgcatcttttatgttggtgcaaaggaccaaaggcagaagttgttctctcaagaggttatg
gccatgaaatttaatgttcttgtaacaacatatgaatttgttatgtttgaccgttccaag
ctttcaagggttgattggaagtatattataattgacgaggcgcagcggatgaaggacaga
gactccgttctggcgcgtgatcttgatcgctatcgctgccagcggcgcctccttctcacc
ggtactcctctacagaatgatctcaaggagctttggtccctcttgaatttgttgcttcca
gaagtatttgacagtagcaaggcattttcagactggttctctaagccttttcagagggat
ggtcctacacatagtgaagaagaggatgattggcttgagacagagaagaaagtaataata
attcacaggctgcatcagattttggaaccttttatgctacgtaggcgtgtggaagatgtt
gaaggatcacttccacggaaggattccattgttttgagatgcagaatgtctgctgttcaa
ggagctatatatgattggatcaagtctactggtaccattagagttgatcctgaagatgag
aaaaggcgtgcacaacggaatcccatgtaccaggtcaagacttacaagaatctcaacaac
aagtgcatggagctaaggaaagtttgtaatcatcctctgctgacatatccattcttaaat
catgggaaagattttatgattagatcttgcgggaagttgtggaatcttgatagaatttta
attaagcttcacaaggcaggtcatcgtgtactcctttttagcacaatgacaaagcttctt
gacatcatggaggactatttgcagtggagacgacttgtttataggcgaattgatggaaca
acaagcttggaagatcgagagtcagcaattgttgacttcaacaggcctggttctgattgt
tttatattcttgcttagtattcgtgctgctggtaggggtctgaatcttcagagtgcagac
actgttgtaatatatgaccctgatccaaatccacaaaatgaggagcaagcagttgctagg
gcccatcgtatagggcagactagggaggtaaaggttatttacatggaagctgttgttgat
aacatatcaagttatcagaaagaggatgaattgagaaatggagggagtgcagatttggag
gatgatcttgctggaaaagacagatacatgggatcaattgaaagtctcatccgcaacaat
atccaacaatacaaaattgatatggcagatgaggtcattaatgctggtcgttttgatcaa
agaacaacccatgaggaaaggcggatgactctggagacactcctgcatgatgaagagaga
tatcaagactctgttcatgatgttccttcattacaggaagtaaaccgtatgattgctagg
actgaaagtgaagtcgagctttttgatcagatggacgaagacttcgattggacaggtgat
atgacgaaacatcatcagattccaaagtggcttcgtgttaactccactgaagtagatgct
gtggtggcgagtctgtccaaaaagccgtcaagaaatatgtcatctgggggcattgcttta
gacactaatgaaacacctgagaaaagaagggggcggccaaagggtactggcaagtactcc
atctacagggaaatcgatgatgaagatcttgaagaatctgatgaagattctgaggagagg
aatactgcatccctacctgaagaaggggaggtaggggaattcgaagatgaagacaatgat
gattcgatacctgataacaaggatgaatcagaggaagagcctgtgaatgatgatgtatat
gaatttactgaaggactaagaagcagaaaagctaataggatggaagaagctggttcaaca
ggctcttcttctggaagcaggagattaccaccacctgtaccttcgtcatcttctaaaaaa
ttgcggtctctatctgcattagatgcccgccctgtctcttcgtcaaagagaactccggat
gacctagaggaaggtgagattgcaatgtctggggactcacatatggacctccagcagtct
gggagctggaatcatgagcgtgatgacggtgaggatgaacaggtactgcaaccaaagata
aaacgcaagcgaagtattcgtcttcgtccaaaacctaatgcagaaaagcaggaagataga
tctggagaaggggtcttccctcagcatgctgccaggcagcaagacacagttcatcctata
gtgaaacagaagcgcaacatgccatctaggaaggtttcaccagcttctaggtcggggaaa
ttgacttacatgtctgggtctggtgagggatctgctgaacgctccaaggaaaattggaac
agtaaggccattgattccaccccccctgagttccgtggcacaaagatgtctgacagtatg
caaagaaagtgcaaaaatgtgataagcaagctttggaggaggattgacaaagaaggtcat
caaatcatacctaatatatcttcttggtggcggaggaatgaaaattcctcattcagaggt
ccggctggtagcaccctggacctacaaaaaatcgaacagcgagttgatggattcgagtat
ggcgctgtaactgaattcatagcggacatgcaacagatgttgaaaagtgtggttcagcac
ttcagctataggcatgaggtccggatagaggctgagaccctccataacttatttttcaac
ataatgaagattgccttcccagattcagacttcagcgaagctaagaatgcaatgtcattt
tcgaatcctggaggagctgcaagtggtgctgctgcccaatcgtcaaagcacaccgcatca
gtccataagcgcagagccagtgccagtgaagcagagcagcatggctcgggacatagcagg
cataatcaatccagcgaggttcccagccggccccacagttccagatcagagagagacccc
agacattctggatccagcagcagggatcagctccaggatggtgctgggttgttgcaccct
agcgatatgttcatcgttaagaagaaaagacaagatcgggcaaggagcagcattgggtcc
ccctccagttcaggccgagctggacctctctcaccagccaaccctgggcggccaggccca
gtcccctcacccagaggtgccaggacgcccttccaaagggatccacacccatctcagcag
tcgatgcattccgctggatggggcgcgcattcagatcaaggaggaagttcttcagcaccc
ggcattggagacatccagtgggcaaagcctgccaagagactgaggaccgacagcggcaag
aggcggccgagcctaatgtga
DBGET
integrated database retrieval system
