Sorghum bicolor (sorghum): 8066537
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Entry
8066537 CDS
T01086
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8066537
Transcription machinery [BR:
sbi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
8066537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
8066537
NCBI-ProteinID:
XP_002440351
UniProt:
C5YWL3
A0A921QBY1
LinkDB
All DBs
Position
9:58569382..58571951
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AA seq
501 aa
AA seq
DB search
MTSTVTTPSRPLAAGTRPRRSWPAVLSLSKGSSGPRRRRPPSTSCAALASPDKQRTANKL
PVSSRKQQQQEEEEEVRATDYNEVAAALESIYKLSPAVEVDEENERHGGHDDDDEGGKKA
KKKRKSRVAGRSTVIVKSRRRRRGRRMDLGKRVEMKSAAVSREGDEDDEGEREREFEEML
LREHSVSTDMGSLDWKRMKIPPVLTSSQSARLFKTMQPMKAIFEVQESLREELQRDPTDA
ELAEATGMTVHQLRRRLDVGRAARNKLIKHNLRLVPYAINKYYPDMGTDERFDDLCQAGA
NGLITAIDRFEPKRGFRISTYALFWIRHSIVRAMTLSSFTRFPFAMESERQEIGKAREEL
AFELGRPATDEEVRRKVGISPQRYRDVLRMTRPTYSLHARNRVTQEELINEVTDDDAIGV
DAGGRHNTLLRLAIDDLLDSLKPKESLVIRQRFGLDGRGKRTLSEIAGNLSISREMVRKY
ELKALMKLKHPTRVEYLRRYM
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgacgacgcccagcaggccgctcgccgccgggacccggccgcggcgg
tcctggcccgccgtgctctcgctcagcaagggcagcagcggcccgcggcggcgtaggccg
ccgtccacgagctgcgctgcgctcgcgtcgcccgacaagcagcgcacggccaacaagctc
ccggtgtcgtcgaggaaacagcagcagcaggaggaggaggaggaggtgagggcgacggac
tacaacgaggtcgcggcggcgctggagagcatctacaagctcagccccgccgtggaggtc
gacgaggagaatgagcgccacggaggccacgacgacgacgacgagggcggcaagaaggcc
aagaagaagaggaaaagcagagtggcgggcaggagcacggtgatcgtgaagagccggcgg
cggcggcgcgggaggaggatggacctcgggaagcgggtggagatgaagagcgccgccgtt
agcagggagggggacgaagacgacgagggggagcgcgagcgcgagttcgaggagatgctg
ctgcgggagcactcggtgtcgacggacatgggcagccttgactggaagcgcatgaagatc
ccgccggtgctcacctcgtcgcagagcgcgcgcctcttcaagaccatgcagcccatgaag
gccatcttcgaagtgcaggagagcttgcgagaggagctgcagagagaccccaccgacgcg
gagctcgccgaggccaccggcatgaccgtccaccagctccgccgccgcctcgacgtcggc
cgggccgccaggaacaagctcatcaagcacaacctccggctggtgccgtacgccatcaac
aagtactacccagacatgggcaccgacgagcggttcgacgacctgtgccaggcgggcgcc
aacgggctgatcacggccatcgaccggttcgagcccaagcgcgggttccgcatctccacc
tacgcgctcttctggatccgccactccatcgtgcgcgccatgacgctgtcaagcttcacc
cgcttcccgttcgccatggagtcggagcggcaggagatcggcaaggcgagggaggagctg
gcgttcgagctcggccggccggccacggacgaggaggtgaggcggaaggtgggcatctcc
ccgcagcggtaccgcgacgtgctgcggatgaccaggcccacctactcgctgcacgccagg
aaccgggtcacgcaggaggagctcatcaacgaggtcaccgacgacgatgccatcggcgtc
gacgccggcggcaggcacaacacgctgctccgcctcgccatcgacgacctcctggactct
ctgaaacccaaggagagcctggtgatcaggcagcgattcgggctggacggcaggggaaag
cgcacgctcagcgagatcgccggcaacctcagcatctcgcgggagatggtgcgcaagtac
gagctcaaggcgctcatgaagctcaagcacccaacaagggtggaatacctgcgcaggtac
atgtga
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integrated database retrieval system
