Sorghum bicolor (sorghum): 8066546
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Entry
8066546 CDS
T01086
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbi03036
]
8066546
Chromosome and associated proteins [BR:
sbi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
8066546
REST complex
8066546
Heterochromatin formation proteins
Other heterochromatin formation proteins
8066546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3_corepress
Sin3a_C
PAH
DUF6432
Rossmann-like_BshC
Motif
Other DBs
NCBI-GeneID:
8066546
NCBI-ProteinID:
XP_021302966
LinkDB
All DBs
Position
9:complement(58687022..58692429)
Genome browser
AA seq
836 aa
AA seq
DB search
MEEAGGEERLNRLLERHGQEVVGFLMFAKAKLSDNAYKELVKAAREIVEQSSNPEGGITV
QKCEEILSQVFVGQTRVLEGFRHLIKAGDPSKDDHPSLHRALSYMNKVKDSAFVSNEDYI
DFLGTLSQSMAKKINEQETYLKVKKYMRHCPELFQTFETYLRPPLSNEQPCRSPNISISK
VLCITPDENHSANHSLDGNEATGNGESLHAEENDGDKIDPLPCWSPSRENELPPKVNPDM
FTRYSTSYSLLSKNCLTLKTSYRTELGQFILNDTLVSSTSGREDCFKFRTKNHYEENIFK
CEDDMFESDMLLQRYTATADFIRNLQDHVDKDMKIQERLTPLHRRCIEQLYDEHGLDMLD
ALSEKIDTSMALVILQSRLNQKIEDLKEAQSSLNKICSNIIANNYYRALDHRSSSFKQLD
KRRMSPKALLAEAREINMARLNNGDKHLSACNNQSTLISENVFKDINLHIHKDIDKMVRY
ACKSCPSEQKLMMIWTTLVQPFVSISCQLQELNGTVAPKEACEHCGLSKTFLRSIPDSSL
ANNYSLSSKRGGYLLNTSNKSASIPDACQTEIEDGEFIPDVGNIQFGSMLGHGNGAASCD
VAAPSGAGLSSQCPGPGHSNCDHSNKSEVHYESREGYDIEMGSSAYSKITAELHDVKGSI
PCCSLVVLLRLHQILYERLVVAKNLSAEASKRGSHTCDLFAGFKEELFNLIMGSTNSSNF
EKYCLTILGPRSYVLFTLNEVIDRIIKQLCKICPVAEDNSILQTHEEVRGPAAGKDLSCH
QNMRTSPDCPTNGSLEHDHQEEGERGSKHNSDIVKPMQNHFQRRKKRKLENSPASI
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagccggtggtgaagaacggctcaataggctgcttgagaggcatggtcaggag
gttgtggggttcctcatgtttgctaaggccaaactgagcgataatgcttacaaggagctc
gtcaaggcagcacgggagattgttgaacaaagttcaaatcctgaaggtggaatcacagtg
caaaaatgcgaagaaatcctatctcaagtgtttgttggccaaactcgtgtcctagaaggc
ttccgtcacctcatcaaagcgggtgatccctccaaggatgaccacccttctttacatcgt
gcactctcttacatgaacaaagtgaaggattcagcttttgtatctaatgaagattacata
gattttttgggcaccttgtctcagtccatggcaaaaaagatcaatgagcaagagacttac
ctaaaggtaaagaaatatatgcgccactgtccagaattatttcaaacctttgaaacttat
ttgcgtccacctctatccaatgagcaaccttgcagaagtccaaatattagtattagcaag
gttttatgcattactccagatgaaaatcatagtgcaaaccatagcttggatggtaatgaa
gcaacaggtaatggagaatcacttcatgcagaagaaaatgatggagacaagattgatccc
ttaccatgctggagtccatcaagagaaaatgaactacccccaaaagtgaacccggatatg
ttcacacgctactctactagctactccctattatcgaagaattgcttaactctaaaaaca
agctaccgcactgagctgggacagttcatattaaatgacacgttggtttcttctacctca
gggagggaggactgttttaagttcagaactaaaaatcactatgaagaaaatattttcaaa
tgtgaagatgacatgtttgagagtgacatgcttttgcaacgctacaccgcaactgctgac
tttattagaaatctgcaagaccatgttgacaaagatatgaaaattcaagagcgtctaact
cccttacataggagatgcattgaacaattatatgatgaacatggcctggacatgcttgat
gctctgtcggagaaaattgataccagtatggctcttgttattctacagtctcgtttaaac
cagaagatagaagatctgaaagaggcacagtcatctttgaataaaatatgctcaaatatt
attgccaataattactacagagcacttgatcatcgcagctcttccttcaaacaattggac
aaaaggaggatgagcccaaaagcattgcttgctgaagctagagaaatcaacatggcaagg
ctgaacaatggggataaacatctctctgcttgcaacaatcaatcaactttgatatcggaa
aatgtatttaaagatattaatcttcatatccacaaggacatagacaagatggttcgttat
gcatgcaaaagttgtccttctgaacagaagctgatgatgatttggacaacattagttcag
ccatttgtttctattagttgtcaactacaagaattgaatggcactgtagctccaaaagaa
gcttgtgaacattgtggtctcagcaaaacttttctcaggagtatccctgactcttcgctc
gctaataattattctttatcttcaaagagaggtggatatcttttaaatacgtccaataag
tctgcttctatacctgacgcttgtcagactgagattgaggatggtgagttcatacctgat
gtaggaaacatccagtttggatccatgcttggacatgggaacggagcagcaagttgtgat
gttgctgctcccagtggggctgggttgagttctcagtgcccagggccaggccatagtaat
tgtgaccacagtaataaatctgaagtgcattatgaatctagagaaggctacgacattgaa
atgggcagttcagcatattccaaaataacagctgaactgcatgatgtgaaaggcagcata
ccttgttgttctctggttgtgctcttaaggcttcaccagattttgtatgagaggctagta
gtagcaaagaatctttcggcagaagcttccaagagaggttcacacacctgtgatttattt
gcagggtttaaggaggagctctttaacctaataatgggctctactaacagttccaatttt
gagaagtactgcctgacaatccttgggccgagatcctatgtactttttactctgaatgag
gtgatagaccgaattatcaagcagctctgtaaaatttgtccagttgctgaagacaactcg
attcttcagacccatgaggaagtgagaggaccggccgcaggcaaagatttatcttgccat
caaaacatgagaacttctccagattgtccaacaaatggttcacttgagcatgatcatcaa
gaggagggagagagaggcagcaagcacaatagcgatattgttaagccgatgcagaaccat
tttcagagaaggaaaaagcgcaagttggagaacagtccagctagcatataa
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