Sorghum bicolor (sorghum): 8066548
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Entry
8066548 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8066548 isoform X2
KO
K03093
RNA polymerase sigma-I factor
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8066548
Transcription machinery [BR:
sbi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
8066548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
8066548
NCBI-ProteinID:
XP_002440362
LinkDB
All DBs
Position
9:58724121..58727075
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AA seq
577 aa
AA seq
DB search
MGLQMIHGRPCAYCCPSSSSSSSSSSSSSAWMMQALPPKQSHHPSLAAMHLLLKRRRDRS
SRDIASSSGVLQITENKSAAANLTKHKQVMSAERKLLDDALDRTSVQYESWMDEETSFWM
DRDNTNNNFQYGLLMQNLEELETSLAGKDLKILENDILAHIQQLGALRSFDASTAVGATL
LDTLTHDQPDSSLLDQQIIEFDPETTPLDEEEQEDSQVVVVRSGKSEERKLKRVRASEKG
SRISVKVNPRRPKKSSRKASSSQFISEWKSHPGRRRIIVREQSALLATIKECASLEKIRE
KMVKEGQEVSYHRWAEAAGMDEAELMSRLQTGYCCRERLLVTTEWLVRCIARSYTGMGTA
LDDLLQAGKMGVLDGAEKFDTRKGCRFSTYVKYWIRKGMLALLAENSGVTLLPARMESIM
RKVKEARRGIRYSEGRNPSDSEVAAAVGVSVANVRLARKCSRRPVSLYSEIGIGQHAKFA
EVIPDEAAAAAEAPDEAALFRGQLRERLLLVLGRLPAREGHVLRLRHGLEDGRCRSLEEI
GGMYRVSKEWIRKIEKSAMARLRDDDDVRRDLHDFVC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgcagatgatccatggcaggccctgcgcctattgctgcccgtcgtcgtcgtcc
tcctcctcctcctcgtcttcctcctctgcgtggatgatgcaggccctgcccccgaagcag
tctcaccatccatcactggcggccatgcatctcctgctaaaacgtcgcagagaccgcagc
agcagggacattgcatcttcatccggcgtcctccaaatcacagagaacaaatcagccgcg
gccaacttaacaaaacacaagcaggtgatgagtgcagaaaggaagctccttgatgacgct
cttgacagaactagtgttcagtatgagagctggatggatgaagagacatcgttctggatg
gacagggataacacgaacaacaattttcagtacggtttgttaatgcagaaccttgaggaa
ttggagacgagtttggctggtaaagacttgaagattctggaaaatgacatccttgcacac
attcagcagcttggagctctgagatcgttcgatgcgtctacggccgtgggcgccaccctg
ctagacaccctaacacatgatcaaccagacagctctctgcttgaccaacaaatcatcgag
tttgatccagagacgactcctctggacgaggaggagcaagaagatagccaagtagtcgtc
gtccggagtggcaagagtgaggagaggaagctgaagagagtcagagcgtcagagaaagga
tccaggatctcagtgaaagtgaatccacgaagacccaagaaatcatcccggaaggcgagt
agcagccagtttatatccgagtggaaaagtcacccaggacgaaggaggatcattgtgcgt
gagcaatcagcactgctagcgaccatcaaggaatgcgcaagccttgagaagattagggag
aagatggtgaaggaagggcaggaggtgagctaccacaggtgggcagaggcagctggaatg
gacgaggcagagctgatgagcaggctgcagacaggctactgctgccgggagaggctgctg
gtgaccaccgagtggctggtcaggtgcatcgcaagatcatacaccggcatggggacggcc
ttggacgatctgcttcaggctgggaagatgggcgttcttgacggcgccgagaagttcgac
acccggaaggggtgcaggttctccacgtacgtcaagtactggatcaggaaagggatgctc
gctctcctcgctgaaaactcaggagtcaccctgctgcctgcaagaatggagagcatcatg
cgcaaggtgaaggaggcgcggcgtgggatcaggtacagcgagggcaggaacccgtcggac
tcggaggtggccgcggccgtcggcgtgtcggtggccaacgtgaggctggcgcgcaagtgc
tcccgcaggcccgtctcgctctactcggagatcgggatcgggcagcacgccaagttcgcg
gaggtgatcccggacgaggcggcggcggccgcggaggcgcccgacgaggcggcgctgttc
cggggccagctgagggagcggctgctgctggtgctgggcaggctgccggcgcgggaggga
cacgtgctgaggctccgacacgggctggaggacggccggtgcaggtcgctggaggagatc
ggcggcatgtaccgcgtgtccaaggagtggatcaggaagatcgagaagtcggccatggcc
aggctcagggacgacgacgacgtgcgtcgcgacctccacgacttcgtctgctga
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