KEGG   Sorghum bicolor (sorghum): 8066563
Entry
8066563           CDS       T01086                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03420  Nucleotide excision repair
sbi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8066563
  09124 Replication and repair
   03420 Nucleotide excision repair
    8066563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbi04121]
    8066563
   03400 DNA repair and recombination proteins [BR:sbi03400]
    8066563
Ubiquitin system [BR:sbi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     8066563
DNA repair and recombination proteins [BR:sbi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      8066563
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      8066563
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 8066563
NCBI-ProteinID: XP_021303604
LinkDB
Position
9:58940371..58949028
AA seq 1089 aa
MSVWNYVVTAHKPTSVSHSCVGNFTSPNQLNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATIELFRPHNETQDFLFIATERYKFCVLQWDAEKSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLHGCVKPTIVVL
YQDNKDVRHVKTYEVALKDKDFVEGPWSQNNVDNGAGLLIPVPAPLGGVIIIGEEQIVYC
NANSTFKAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIEYLGE
TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADASGSFVEILERYVNLGPIVDFCVVDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNATNDLLIQVTANSVRLVSCTSREL
VDQWNAPAGFSVNVASANASQVLLATGGGHLVYLEIRDSKLVEVKHAQLEHEISCLDLNP
IGENPQYSSLAAVGMWTDISVRIFSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGNLFSFLLNASTGELTDRKKVTLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSKTLAFCSFKYNQSVEESETHLIRLLDHQTFESLCVYPLDQYEFGCSIISCSFADD
NNVYYCVGTAYVIPEENEPTKGRILVFAVEDGSLQLIVEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMSREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEES
AIEERARDYNANWMTAVEMLDDEVYVGAENGYNLFTVRKNSDAATDDERARLEVVGEYHL
GEFVNRFRHGSLVMRLPDSEIGQIPTVIFGTINGVIGIIASLPHDQYVFLEKLQSTLVKY
IKGVGNLSHEQWRSFHNDKKTAEARNFLDGDLIESFLDLSRSKMEEVSKAMGVPVEELSK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagcgtgtggaactacgtcgtcacggcgcacaagcccaccagcgtcagccactcctgc
gtcggcaactttaccagccccaaccagctcaatctcattatcgcgaaatgtacccggatc
gagatccatttgctgacccctcagggccttcagccgatgcttgacgtacctatatatgga
agaattgcaacgattgagctcttccggcctcataatgagactcaggattttcttttcatt
gctacggagaggtacaaattctgtgttctgcaatgggatgcagaaaaatcagagctaatc
accagagccatgggtgatgtttctgatcgcattggccgccctactgacaatggacagatt
ggaatcatcgaccctgactgcagactcattggcctccatctctatgatggcttatttaag
gttataccatttgacaacaaagggcagctgaaggaagctttcaatatcagactggaagaa
cttcaagtactggacatcaaatttctgcatggttgtgttaaacctactattgttgtcctc
taccaggataataaagacgtgaggcatgttaagacttatgaagttgcactgaaggacaaa
gattttgttgagggtccttggtctcagaataatgtagacaatggtgctggtttgttaata
ccagtaccagctccacttggtggtgtgataataattggcgaggagcaaatagtttactgc
aatgccaattctacatttaaagcgataccaataaaacaatccatcattagagcttatgga
cgggttgacccagatggttctcgatatttactcggtgataatactggaattcttcattta
cttgtccttacccatgaacgagaaagggttactggtttgaaaattgaatacttgggagag
acttccattgcatcatcaatttcatatctcgataatggcgttgtttatgttggttcacgg
tttggcgattcacagctggtgaagctgaacctccaagctgatgcaagtggttcatttgtg
gaaatccttgaacggtatgttaatcttggaccgattgtggacttttgcgtggttgacctt
gataggcagggtcaaggtcaggtggtcacttgttctggggcatttaaagatggttccctt
cgggtggttcggaatggtatagggattaatgagcaggcttcagtagaactccaaggcata
aagggattatggtcattgaaatcttcgttcaatgatccatatgacatgtaccttgttgtg
agctttataagtgagacacgattcttggcaatgaacatggaagatgaactagaagagact
gagatagaggggtttgatgcacaaactcaaaccctgttttgtcagaatgcgaccaatgat
cttcttatacaggttactgctaattctgttcggctagtcagttgtacctcccgggagcta
gtggatcaatggaatgcaccagcaggattctcagtcaatgttgcttcagctaatgctagt
caggttctgttggcaaccggtggtggccatctcgtttacctggaaattagggattctaaa
cttgttgaagtgaagcatgcacagctagaacatgagatttcttgccttgatttgaaccca
atcggggagaatccacagtatagttccctagctgctgttgggatgtggacagatataagc
gttagaatattttcacttccagaccttgaattaataaggaaggaaaatttgggtggagaa
attgttcctcggtctgttctgctgtgcaccttggagggggtttcatatttgctttgtgct
cttggggatggtaatcttttcagttttctgctgaatgcaagtacaggtgaactgactgat
agaaagaaagttacccttgggacccaacccatcagccttcgtaccttctcatcaaagggt
accacccatgtgtttgcttcatcagataggccaactgtcatctatagcagcaataagaag
cttctctatagcaatgtcaatttgaaagaggttaatcatatgtgccctttcaatacagct
gcttttccagacagtcttgcaattgctaaagagggtgagctttcaattggaactattgat
gatatccagaagcttcatatccgcacaatcccccttaatgaacaagcacgtcgcatttgt
caccaggagcaatcaaagacactagcattttgcagtttcaagtacaaccagagtgtggag
gaaagtgagactcatttaatacgtctgctagatcatcagacttttgagtccctgtgtgta
tatcctctagatcaatatgaatttggctgctccatcattagctgttcttttgcggatgat
aataatgtttattactgtgtgggaactgcatatgttatacctgaagaaaatgaaccaaca
aagggtcgaatccttgtatttgcagttgaagatggaagtttgcaattaattgtggagaaa
gaaaccaaaggagcagtttattcactgaatgcattcaatgggaaattgttggctgctatc
aaccagaagattcaattatataagtggatgtcacgcgaggatggttcacatgagctgcaa
tctgagtgtggccaccatgggcacatacttgccttgtatactcaaacgcgtggtgacttc
attgtggttggcgatctgatgaaatcaatatctttgctggtgtataagcatgaggaaagt
gcaattgaagagcgtgctagggattacaatgcaaactggatgactgcagttgagatgctt
gatgatgaagtctatgttggggcggagaatggctataacctattcaccgtgcgcaagaac
agcgatgcagccacagatgacgaaagggccaggcttgaggtcgtgggggagtaccatctt
ggggagtttgtgaacagattccgccatggttcactggtgatgcgccttccagactcagag
attgggcagatccctacagtcatctttggcacaataaacggggtaattggcattattgcc
tccctcccgcatgatcaatacgtcttcctggagaagctgcagtcgactcttgtgaagtac
ataaagggcgttgggaacctgagccatgagcaatggcggtcgttccataacgacaagaag
acggcggaggctcggaacttccttgacggtgacctgatcgagtcgttccttgaccttagc
cggagcaagatggaggaggtgtccaaggctatgggcgtcccggtggaggagctgtccaag
agggtggaagagctgacgaggcttcactag

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