Sorghum bicolor (sorghum): 8066570
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Entry
8066570 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8066570
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
8066570
Enzymes [BR:
sbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
8066570
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
8066570
NCBI-ProteinID:
XP_021303662
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Position
9:complement(59278491..59281671)
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AA seq
681 aa
AA seq
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MQVVVVDNGMVQVSLSTPQGHITAVRVNSDHQNLLHYNATQANSGGYWDVVWNYPGSNQP
KGMMDMLDGTEFKVVSSDEEQVELSFRSSYSPSSSPPNSLRLNVDKRFVMLRGSSGFYCY
AILEHARECPALNISVARLAFKLNEDRFRYMAISDDIQRYMPSAADRDPPRGVPLDYKEA
VLLVDPVEPEFKGEVDDKYQYSMDNKDNTVHGWIAADSGGGGVGFWVITPSNEFKNGGPL
KRELTSHTGPTSLSVFLGPHYVGKDMVINFEEGEYWKKVLGPIFVYLNSGHHPLPAAGGS
NDDDDDNVTNHLWEDAKAQAQAEVSKWPYSFPRSPDFAKAGERGSVTGRLWVRDRSYSNN
DDKQQAAATQQPEPAAMAYVGLASPGKPGSWATESKGYQFWTRATSDGSFSIGNVREGTY
NLYAWVPGILGDYMHVSPVTIAASATAAVVNLGDDLVFEPPRSGPTLWEIGVPDRTAAEF
YVPDADPKYASRLFLTKDRYRQYGLWERYAALYPAGDLVFTVGKSNHSRDWFFAHVTRRV
VGGGGVVGNNNNNIETTTTTTTTSIVPTTWQIRFHLDRVVADGTYTLRIALAASHMSNLK
VQVNSGAGAGAGGEVNLLGDNNAIARHGIRGTQWSLDMDVKGHLLNQGDNTIYINQTTPY
QFAGVMYDYIRLEGPSTSTYS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggtcgtggtggacaatggcatggtgcaggtgtcgctgtccacgccgcagggc
cacatcaccgccgtccgcgtcaacagcgaccaccaaaacctgctgcactacaacgccacc
caagcaaactcaggagggtactgggatgtggtttggaactaccctggctcaaatcaacca
aaaggaatgatggatatgttggatggtacagagttcaaggttgtatcctcagatgaagag
caagtggagctttctttcaggagctcatacagtccttcgtcatcacctccaaacagcctc
cggctaaacgtagacaagaggtttgtgatgctgcgaggcagctccgggttctactgctac
gccatcttggagcatgcccgggagtgtccagcgctcaacatctccgtggctcgcctcgcc
ttcaagctcaacgaggacaggttccgttacatggccatctccgacgacatccagagatac
atgccgagtgcggcggacagggatccaccccgcggcgtgccgctggactacaaggaggcc
gtcctgctggtggaccccgtggagccggagttcaaaggcgaggtggatgacaagtaccag
tactccatggacaacaaggataacacggtgcacggatggatcgccgccgattccggcggc
ggtggcgtcggcttctgggtcatcactcccagcaacgagttcaagaacggcgggccgctc
aagcgggagctcacctcccacaccggccccacctccctctcggtgtttctagggccgcat
tacgtgggcaaggacatggttatcaatttcgaggagggcgagtactggaagaaagtgctg
ggccccatcttcgtctacctcaactccggccaccacccgctgcccgccgccggcggctcc
aacgacgacgacgacgacaatgtcaccaatcatctctgggaggacgccaaggcgcaggcg
caggcagaggtgagcaaatggccctacagcttcccccggtcgccggactttgcaaaggca
ggtgagagaggttccgtcacagggaggctctgggtcagggacaggtcctactccaacaac
gacgacaagcagcaggcagcagcgacgcagcagcctgagcctgctgccatggcttatgtc
ggcctcgcttcgcctggcaaacctggctcctgggccacagagagcaaggggtatcagttc
tggacgagggccacatcggacggcagcttcagcatcggcaatgtccgtgaagggacgtac
aatctgtacgcatgggttcccgggatccttggagactacatgcatgtgtctcctgtaacc
atagcagcaagtgccaccgccgccgtcgtcaacctcggtgacgacctcgtgttcgagcct
ccaagatcagggcccacgctgtgggagatcggcgtcccggaccggacggcggcggagttc
tacgtccctgacgccgaccccaagtacgccagcaggctgtttctcaccaaggacaggtac
cggcagtacggcttgtgggagaggtacgccgccctgtaccctgcaggcgacctcgtgttc
acggtcggcaagagcaaccactccagggactggttctttgctcatgtcacaagaagagtc
gtcggcggcggcggcgtcgtgggcaacaacaataataatattgagacgacgacgacgacg
acgacgacgagcatagtgccaacgacatggcagatacgtttccatctggaccgagtggtg
gcagacggcacctacaccctgcgcattgctctcgcagcctctcacatgtccaacctcaag
gtgcaagtgaacagcggcgccggcgccggcgccggaggagaggtgaatctgttgggcgac
aacaacgccatcgcgcggcacggcatacgcggcacgcagtggagcctggacatggatgtc
aagggccacctgctcaaccaaggggacaacaccatctacatcaaccagacaactccctac
cagtttgccggggtcatgtacgactacattcgccttgaagggccttccacttccacatat
agctag
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