KEGG   Sorghum bicolor (sorghum): 8066720
Entry
8066720           CDS       T01086                                 
Name
(RefSeq) SEC12-like protein 2
  KO
K14003  prolactin regulatory element-binding protein
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8066720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8066720
Membrane trafficking [BR:sbi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    8066720
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WD40 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR19_1st EIF3I Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 WD40_like Beta-prop_RIG_2nd Beta-prop_Vps41 RMC1_N DUF7165 Beta-prop_NUP159_NUP214 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 8066720
NCBI-ProteinID: XP_002451112
UniProt: C5Y6B7
LinkDB
Position
5:complement(66912205..66916398)
AA seq 402 aa
MATRGGGGSQSYGFPIYCAAWLPLAHILKPDPPAAEADADADADAASSSPSSPPPPMAVL
GGGGGEGRSGVPNKLVVAALAAGEEAAAPAALSPETVLEVKTQEEVPYRMAVHPRGDGVF
CAFPNGCRLYRWESQEGEGPQNLALEPDQEALAELKDVGLQLAVSFSGEGSILAIGGEDG
HLRVFKWPAMGSVLTETDTKTSIKDLTISSDEKFLAVNRSSGPCRVWDLQSSEVVASLSR
EAGEIFGFCRFCNKTDNSHVLFITVMQGDYGKIVSWNTTSWTRIGSKKITREAISAFAVS
PNGALLGIGTIEGSIIILSSKDMRTLVTVKKAHLGIVTTLAFSQDSRTLLSTSFDSSARV
TSVGSPKSNGTSIWPMLLVIILAILVYYCMQHKEDILAMLPR
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcgactcgcggcggcggcggtagccagtcctacggcttcccgatctactgcgccgcc
tggctcccgctcgcccacatcctcaagcccgaccctcccgccgccgaggcggacgcggac
gcggacgcggatgctgcctcctcctccccctcctctcccccgccccctatggctgtcctc
gggggcggcggcggggagggccggagcggggtgccgaacaagctcgtggtggcggccctc
gccgccggggaagaggccgccgcgccggccgccctttcccccgagacggtgcttgaggtg
aagacccaagaggaggtgccgtacagaatggctgtacacccgcgcggcgatggcgtgttc
tgcgctttccccaacggctgcaggttgtaccgatgggaatcacaggaaggagagggacca
cagaacctggccttggagccagaccaggaagctttagcggagctgaaagatgttggtttg
cagttggccgtatccttcagtggagaaggttcaatacttgccattggtggtgaggatggg
catttaagagtcttcaagtggcctgctatggggtctgttctcacagaaactgatactaaa
acatcgattaaggatcttaccatcagttccgatgagaagtttcttgctgtgaataggagc
agcgggccatgtagagtttgggatctgcagtcatctgaagttgtagccagtctgtcaaga
gaagcaggggaaatatttggattctgcagattctgtaataagactgacaacagtcatgtc
ctatttataacagtgatgcaaggtgattatggaaaaatagtatcttggaatactacctca
tggacgagaatcggttcaaagaaaataactcgtgaggccatttcagcttttgctgtgtca
cccaacggcgctcttcttggaattggaacaattgaaggaagcatcatcatactgagctca
aaagacatgcggacacttgtaacagttaaaaaggctcatcttggtattgttactacactg
gccttctcccaggattcaagaacattgctgtcaacttcctttgactcttctgcaagggtg
acatctgttgggtccccgaagagtaatggaacaagcatatggcccatgctactagttatt
attcttgcaattttggtgtactactgtatgcagcacaaagaagacatcttggcaatgttg
ccgcgttga

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