Sorghum bicolor (sorghum): 8066720
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Entry
8066720 CDS
T01086
Name
(RefSeq) SEC12-like protein 2
KO
K14003
prolactin regulatory element-binding protein
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8066720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8066720
Membrane trafficking [BR:
sbi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8066720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
WD40_like
Beta-prop_RIG_2nd
Beta-prop_Vps41
RMC1_N
DUF7165
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
8066720
NCBI-ProteinID:
XP_002451112
UniProt:
C5Y6B7
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Position
5:complement(66912205..66916398)
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AA seq
402 aa
AA seq
DB search
MATRGGGGSQSYGFPIYCAAWLPLAHILKPDPPAAEADADADADAASSSPSSPPPPMAVL
GGGGGEGRSGVPNKLVVAALAAGEEAAAPAALSPETVLEVKTQEEVPYRMAVHPRGDGVF
CAFPNGCRLYRWESQEGEGPQNLALEPDQEALAELKDVGLQLAVSFSGEGSILAIGGEDG
HLRVFKWPAMGSVLTETDTKTSIKDLTISSDEKFLAVNRSSGPCRVWDLQSSEVVASLSR
EAGEIFGFCRFCNKTDNSHVLFITVMQGDYGKIVSWNTTSWTRIGSKKITREAISAFAVS
PNGALLGIGTIEGSIIILSSKDMRTLVTVKKAHLGIVTTLAFSQDSRTLLSTSFDSSARV
TSVGSPKSNGTSIWPMLLVIILAILVYYCMQHKEDILAMLPR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgcggcggcggcggtagccagtcctacggcttcccgatctactgcgccgcc
tggctcccgctcgcccacatcctcaagcccgaccctcccgccgccgaggcggacgcggac
gcggacgcggatgctgcctcctcctccccctcctctcccccgccccctatggctgtcctc
gggggcggcggcggggagggccggagcggggtgccgaacaagctcgtggtggcggccctc
gccgccggggaagaggccgccgcgccggccgccctttcccccgagacggtgcttgaggtg
aagacccaagaggaggtgccgtacagaatggctgtacacccgcgcggcgatggcgtgttc
tgcgctttccccaacggctgcaggttgtaccgatgggaatcacaggaaggagagggacca
cagaacctggccttggagccagaccaggaagctttagcggagctgaaagatgttggtttg
cagttggccgtatccttcagtggagaaggttcaatacttgccattggtggtgaggatggg
catttaagagtcttcaagtggcctgctatggggtctgttctcacagaaactgatactaaa
acatcgattaaggatcttaccatcagttccgatgagaagtttcttgctgtgaataggagc
agcgggccatgtagagtttgggatctgcagtcatctgaagttgtagccagtctgtcaaga
gaagcaggggaaatatttggattctgcagattctgtaataagactgacaacagtcatgtc
ctatttataacagtgatgcaaggtgattatggaaaaatagtatcttggaatactacctca
tggacgagaatcggttcaaagaaaataactcgtgaggccatttcagcttttgctgtgtca
cccaacggcgctcttcttggaattggaacaattgaaggaagcatcatcatactgagctca
aaagacatgcggacacttgtaacagttaaaaaggctcatcttggtattgttactacactg
gccttctcccaggattcaagaacattgctgtcaacttcctttgactcttctgcaagggtg
acatctgttgggtccccgaagagtaatggaacaagcatatggcccatgctactagttatt
attcttgcaattttggtgtactactgtatgcagcacaaagaagacatcttggcaatgttg
ccgcgttga
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integrated database retrieval system